Kari Kopra - UTU Research Portal - UTU Research Portal

Kari Kopra

- Docent,
Department of Chemistry (Faculty of Science)
- University Teacher,
Pharmaseutical Chemistry (Department of Chemistry)

khkopr@utu.fi

ORCID identifier: https://orcid.org/0000-0001-7585-6020

Publications

1 of 3

ADP-ribosyltransferase-based biocatalysis of non-hydrolyzable NAD+ analogs (2025)
- Journal of Biological Chemistry
Sakari, Moona; Bhadane, Rajendra; Kumar, Sujit; Azevedo, Rita; Malakoutikhah, Morteza; Masoumi, Ahmadreza; Littler, Dene R; Härmä, Harri; Kopra, Kari; Pulliainen, Art To
(A1 Refereed original research article in a scientific journal)
Beyond KRAS(G12C): Biochemical and Computational Characterization of Sotorasib and Adagrasib Binding Specificity and the Critical Role of H95 and Y96 (2024)
- ACS Chemical Biology
Mahran, Randa; Kapp, Jonas N.; Valtonen, Salla; Champagne, Allison; Ning, Jinying; Gillette, William; Stephen, Andrew G.; Hao, Feng; Pluckthun, Andreas; Härmä, Harri; Pantsar, Tatu; Kopra, Kari
(A1 Refereed original research article in a scientific journal)
Fluorescence-Based Protein Stability Monitoring : A Review (2024)
- International Journal of Molecular Sciences
Gooran Negin, Kopra Kari
(A2 Refereed review article in a scientific journal )
Label-free electronic detection of peptide post-translational modification with functional enzyme-driven assay at the physical limit (2024)
- Cell Reports Physical Science
Macchia, Eleonora; Björkström, Kim; Tewari, Amit; Eskonen, Ville; Luukkonen, Axel; Ghafari, Amir Mohammad; Sarcina, Lucia; Caputo, Mariapia; Tong-Ochoa, Natalia; Kopra, Kari; Pettersson, Fredrik; Gounani, Zahra; Torsi, Luisa; Härmä, Harri; Österbacka, Ronald
(A1 Refereed original research article in a scientific journal)
Luminescence-Based Techniques for KRAS Thermal Stability Monitoring (2024)
- Methods in Molecular Biology
KRAS : Methods and Protocols Kopra Kari
(A3 Refereed book chapter or chapter in a compilation book)
Homogeneous luminescent quantitation of cellular guanosine and adenosine triphosphates (GTP and ATP) using QT-Luc GTP&ATP assay (2023)
- Analytical and Bioanalytical Chemistry
Kopra Kari, Mahran Randa, Yli-Hollo Titta, Tabata Sho, Vuorinen Emmiliisa, Fujii Yuki, Vuorinen Iida, Ogawa-Iio Aki, Hirayama Akiyoshi, Soga Tomoyoshi, Sasaki Atsuo T, Härmä Harri
(A1 Refereed original research article in a scientific journal)
Isothermal chemical denaturation assay for monitoring protein stability and inhibitor interactions (2023)
- Scientific Reports
Mahran Randa, Vello Niklas, Komulainen Anita, Malakoutikhah Morteza, Härmä Harri, Kopra Kari
(A1 Refereed original research article in a scientific journal)
Nanomolar Protein Thermal Profiling with Modified Cyanine Dyes (2023)
- Analytical Chemistry
Malakoutikhah Morteza, Mahran Randa, Gooran Negin, Masoumi Ahmadreza, Lundell Katri, Liljeblad Arto, Guiley Keelan, Dai Shizhong, Zheng Qinheng, Zhu Lawrence, Shokat Kevan M., Kopra Kari, Härmä Harri
(A1 Refereed original research article in a scientific journal)
Luminophore Chemistry for Detection of Urinary Bladder Cancer - Comparison to Cytology and Urinary Rapid Tests (BTA stat®, NMP22® BladderChek® and UBC® Rapid Test) (2022)
- Anticancer Research
Ecke Thorsten H, Scislowski Mikolaj, Hassan Nazia, Saura Mari, Hallmann Steffen, Koch Stefan, Vuolle Sari, Malakoutikhah Morteza, Kopra Kari, Härmä Harri
(A1 Refereed original research article in a scientific journal)
Rapid high-throughput compatible label-free virus particle quantification method based on time-resolved luminescence (2022)
- Analytical and Bioanalytical Chemistry
Kopra Kari, Hassan Nazia, Vuorinen Emmiliisa, Valtonen Salla, Mahran Randa, Habib Huda, Jalkanen Pinja, Susi Petri, Hytönen Vesa, Hankaniemi Minna, Ylä-Herttuala Seppo, Kakkola Laura, Peurla Markus, Härmä Harri
(A1 Refereed original research article in a scientific journal)
Thermal Shift Assay for Small GTPase Stability Screening: Evaluation and Suitability (2022)
- International Journal of Molecular Sciences
Kopra Kari, Valtonen Salla, Mahran Randa, Kapp Jonas N, Hassan Nazia, Gillette William, Dennis Bryce, Li Lianbo, Westover Kenneth D, Plückthun Andreas, Härmä Harri
(A1 Refereed original research article in a scientific journal)
Methods to Monitor Ras Activation State (2021) Ras Activity and Signaling: Methods and Protocols Kopra Kari, Härmä Harri
(A3 Refereed book chapter or chapter in a compilation book)
Protease substrate‐independent universal assay for monitoring digestion of native unmodified proteins (2021)
- International Journal of Molecular Sciences
Vuorinen Emmiliisa, Valtonen Salla, Hassan Nazia, Mahran Randa, Habib Huda, Malakoutikhah Morteza, Kopra Kari, Härmä, Harri
(A1 Refereed original research article in a scientific journal)
Sensitive, homogeneous, and label-free protein-probe assay for antibody aggregation and thermal stability studies (2021)
- mAbs
Valtonen Salla, Vuorinen Emmiliisa, Eskonen Ville, Malakoutikhah Morteza, Kopra Kari, Härmä Harri
(A1 Refereed original research article in a scientific journal)
Homogeneous Dual-Parametric-Coupled Assay for Simultaneous Nucleotide Exchange and KRAS/RAF-RBD Interaction Monitoring (2020)
- Analytical Chemistry
Kari Kopra, Emmiliisa Vuorinen, Maria Abreu-Blanco, Qi Wang, Ville Eskonen, William Gillette, Arto T. Pulliainen, Matthew Holderfield, Harri Härmä
(A1 Refereed original research article in a scientific journal)
Homogeneous single-label cGMP detection platform for the functional study of nitric oxide-sensitive (soluble) guanylyl cyclases and cGMP-specific phosphodiesterases (2020)
- Scientific Reports
Kari Kopra, Iraida Sharina, Emil Martin, Harri Härmä
(A1 Refereed original research article in a scientific journal)
Nanomolar Protein-Protein Interaction Monitoring with a Label-Free Protein-Probe Technique (2020)
- Analytical Chemistry
Valtonen S, Vuorinen E, Kariniemi T, Eskonen V, Le Quesne J, Bushell M, Härmä H, Kopra K
(A1 Refereed original research article in a scientific journal)
Sensitive Label-Free Thermal Stability Assay for Protein Denaturation and Protein-Ligand Interaction Studies (2020)
- Analytical Chemistry
Emmiliisa Vuorinen, Salla Valtonen, Ville Eskonen, Taru Kariniemi, Jelena Jakovleva, Kari Kopra, Harri Härmä
(A1 Refereed original research article in a scientific journal)
Single-Peptide TR-FRET Detection Platform for Cysteine-Specific Post-Translational Modifications (2020)
- Analytical Chemistry
Eskonen V, Tong-Ochoa N, Mattsson L, Miettinen M, Lastusaari M, Pulliainen AT, Kopra K, Härmä H
(A1 Refereed original research article in a scientific journal)
eIF4A2 drives repression of translation at initiation by Ccr4-Not through purine-rich motifs in the 5′UTR (2019)
- Genome Biology
Ania Wilczynska, Sarah L. Gillen, Tobias Schmidt, Hedda A. Meijer, Rebekah Jukes-Jones, Claudia Langlais, Kari Kopra, Wei-Ting Lu, Jack D. Godfrey, Benjamin R. Hawley, Kelly Hodge, Sara Zanivan, Kelvin Cain, John Le Quesne, Martin Bushell
(A1 Refereed original research article in a scientific journal)