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- A Generalized Trust Region Newton Method Applied to Noise Reduction (2012)
 - A generative model and a generalized trust region Newton method for noise reduction (2014)
 - Aggregate subgradient method for nonsmooth DC optimization (2021)
 - A harmonized resource of integrated prostate cancer clinical, -omic, and signature features (2023)
 - A Hierarchical Ornstein-Uhlenbeck Model for Stochastic Time Series Analysis (2018)
 - Alchemy & algorithms: perspectives on the philosophy and history of open science (2017)
 - An adaptation of NSGA-II to the stability radius calculation for the shortest path problem (2011)
 - Analysis of Chaotic Data with Mathematica (2015)
 - Analysis of Time-Resolved Gene Expression Measurements across Individuals (2013)
 - Analyzing Stability of Extreme Portfolios
(2021) 



