Improved Synthesis Strategy for N-Methoxy-1,3-oxazinane Nucleic Acids (MOANAs)




Wallin Josefiina, Lönnberg Tuomas

PublisherWILEY-V C H VERLAG GMBH

2022

European Journal of Organic Chemistry

EUROPEAN JOURNAL OF ORGANIC CHEMISTRY

EUR J ORG CHEM

e202200538

2022

35

7

1434-193X

1434-193X

DOIhttps://doi.org/10.1002/ejoc.202200538

http://dx.doi.org/10.1002%2Fejoc.202200538

https://research.utu.fi/converis/portal/detail/Publication/176586536



Dependence of the hydrolysis rate of a series of N-methoxy-2-phenyl-1,3-oxazinanes on the Hammett substituent constant of the substituent of the phenyl ring was determined, yielding a reaction constant p=-1.40 +/- 0.05. Based on this information, 4-(benzoyloxy)benzaldehyde was selected as a protecting group for a new (2R,3S)-4-(methoxyamino)butane-1,2,3-triol phosphoramidite building block. The yield of the preparation of this building block as well as its coupling in automated oligonucleotide synthesis were greatly improved compared to the method reported previously. The 2-[4-(benzoyloxy)phenyl]-1,3-oxazine protection persisted throughout the synthesis of short oligonucleotides but was rapidly removed when the oligonucleotides were released from solid support and dissolved in water.


Last updated on 2024-26-11 at 21:37