A1 Refereed original research article in a scientific journal
Improved Synthesis Strategy for N-Methoxy-1,3-oxazinane Nucleic Acids (MOANAs)
Authors: Wallin Josefiina, Lönnberg Tuomas
Publisher: WILEY-V C H VERLAG GMBH
Publication year: 2022
Journal: European Journal of Organic Chemistry
Journal name in source: EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
Journal acronym: EUR J ORG CHEM
Article number: e202200538
Volume: 2022
Issue: 35
Number of pages: 7
ISSN: 1434-193X
eISSN: 1434-193X
DOI: https://doi.org/10.1002/ejoc.202200538
Web address : http://dx.doi.org/10.1002%2Fejoc.202200538
Self-archived copy’s web address: https://research.utu.fi/converis/portal/detail/Publication/176586536
Dependence of the hydrolysis rate of a series of N-methoxy-2-phenyl-1,3-oxazinanes on the Hammett substituent constant of the substituent of the phenyl ring was determined, yielding a reaction constant p=-1.40 +/- 0.05. Based on this information, 4-(benzoyloxy)benzaldehyde was selected as a protecting group for a new (2R,3S)-4-(methoxyamino)butane-1,2,3-triol phosphoramidite building block. The yield of the preparation of this building block as well as its coupling in automated oligonucleotide synthesis were greatly improved compared to the method reported previously. The 2-[4-(benzoyloxy)phenyl]-1,3-oxazine protection persisted throughout the synthesis of short oligonucleotides but was rapidly removed when the oligonucleotides were released from solid support and dissolved in water.
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