Tapio Salakoski
 

Faculty of Science and Engineering

tapio.salakoski@utu.fi

+358 29 450 2708

+358 40 032 6978

Vesilinnantie 5

Turku

Artificial Intelligence, especially Language technology and Machine Learning
Bio and Health Informatics
Learning Analytics and Technology
Digital Humanities

  
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  • Ensemble of Convolutional Neural Networks for Medicine Intake Recognition in Twitter  (2017)  
    • CEUR Workshop Proceedings
    Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop (SMM4H 2017) Kai Hakala, Farrokh Mehryary, Hans Moen, Suwisa Kaewphan, Tapio Salakoski, Filip Ginter


  • EPE 2017: The Biomedical Event Extraction Downstream Application  (2017)  Proceedings of the 2017 Shared Task on Extrinsic Parser Evaluation (EPE 2017) at the Fourth International Conference on Dependency Linguistics (Depling 2017) and the 15th International Conference on Parsing Technologies (IWTP 2017) Björne J, Ginter F, Salakoski T


  • An expanded evaluation of protein function prediction methods shows an improvement in accuracy  (2016)  
    • Genome Biology
     Jiang YX, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo DCE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SME, Martelli PL, Profiti G, Casadio R, Cao RZ, Zhong Z, Cheng JL, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Toronen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Dukka BKC, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang HX, Paccanaro A, Gillis J, Sedeno-Cortes AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong QT, Ning W, Zhou YP, Tian WD, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SCE, del Pozo A, Fernandez JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A, Rehman HU, Re M, Mesiti M, Valentini G, Bargsten JW, van Dijk ADJ, Gemovic B, Glisic S, Perovic V, Veljkovic V, Veljkovic N, Almeida-e-Silva DC, Vencio RZN, Sharan M, Vogel J, Kansakar L, Zhang S, Vucetic S, Wang Z, Sternberg MJE, Wass MN, Huntley RP, Martin MJ, O'Donovan C, Robinson PN, Moreau Y, Tramontano A, Babbitt PC, Brenner SE, Linial M, Orengo CA, Rost B, Greene CS, Mooney SD, Friedberg I, Radivojac P


  • Automatically assessed electronic exams in programming courses  (2016)  Proceedings of the Australasian Computer Science Week Teemu Rajala, Erkki Kaila, Rolf Lindén, Einari Kurvinen, Erno Lokkila, Mikko-Jussi Laakso, Tapio Salakoski


  • Automatic Assessment and Immediate Feedback in Third Grade Mathematics  (2016)  Proceedings of IICE 2016, Ireland International Conference on Education, Dublin, Ireland, April 25-28, 2016 Kurvinen Einari, Lokkila Erno, Lindén Rolf, Kaila Erkki, Laakso Mikko-Jussi, Salakoski Tapio


  • Comparison of automatic summarisation methods for clinical free text notes  (2016)  
    • Artificial Intelligence in Medicine
     Hans Moen, Laura-Maria Peltonen, Juho Heimonen, Antti Airola, Tapio Pahikkala, Tapio Salakoski, Sanna Salanterä


  • Deep Learning With Minimal Training Data: TurkuNLP Entry in the BioNLP Shared Task 2016  (2016)  Proceedings of the 4th BioNLP Shared Task Workshop Farrokh Mehryary, Jari Bjorne, Sampo Pyysalo, Tapio Salakoski, Filip Ginter


  • Factors Affecting the Availability of Electronic Patient Records for Secondary Purposes – A Case Study  (2016)  Building Sustainable Health Ecosystems: 6th International Conference on Well-Being in the Information Society, WIS 2016, Tampere, Finland, September 16-18, 2016, Proceedings Antti Vikström, Sanaz Rahimi Moosavi, Hans Moen, Tapio Salakoski, Sanna Salanterä


  • How students’ programming process differs from experts – a case study with a robot programming exercise  (2016)  
    • EDULEARN proceedings
    EDULEARN16 Proceedings E. Lokkila, T. Rajala, A. Veerasamy, P. Enges-Pyykönen, M.J. Laakso, T. Salakoski


  • Medical Warning System Based on Internet of Things Using Fog Computing  (2016)  IWBIS 2016 International Workshop on Big Data and Information Security Iman Azimi, Arman Anzanpour, Amir M. Rahmani, Pasi Liljeberg, and Tapio Salakoski



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