Tapio Salakoski

- Vice Rector,
University Management (University Management and Central Services)

Faculty of Science and Engineering

tapio.salakoski@utu.fi

+358 29 450 2708

+358 40 032 6978

Vesilinnantie 5

Turku

Areas of expertise

Artificial Intelligence, especially Language technology and Machine Learning
Bio and Health Informatics
Learning Analytics and Technology
Digital Humanities

Publications

7 of 10

Learning Valued Relations from Data (2012)
- Advances in intelligent and soft computing
Eurofuse 2011 Waegeman Willem, Pahikkala Tapio, Airola Antti, Salakoski Tapio, De Baets Bernard
(A4 Refereed article in a conference publication )
Novice learning (2012) Encyclopedia of the Sciences of Learning Laakso Mikko-Jussi, Rajala Teemu, Kaila Erkki, Salakoski Tapio
(B2 Non-refereed book chapter or chapter in a compilation book)
Parallelized Online Regularized Least-Squares for Adaptive Embedded Systems (2012)
- International Journal of Embedded and Real-Time Communication Systems
Pahikkala T, Airola A, Xu TC, Liljeberg P, Tenhunen H, Salakoski T
(A1 Refereed original research article in a scientific journal)
PubMed-Scale Event Extraction for Post-Translational Modifications, Epigenetics and Protein Structural Relations (2012) BioNLP: Proceedings of the 2012 Workshop on Biomedical Natural Language Processing Björne J, Van Landeghem S, Pyysalo S, Ohta T, Ginter F, Van de Peer Y, Ananiadou S, Salakoski T
(A4 Refereed article in a conference publication )
Semantically linking molecular entities in literature through entity relationships (2012)
- BMC Bioinformatics
Van Landeghem S, Björne J, Abeel T, De Baets B, Salakoski T, Peer Y
(A1 Refereed original research article in a scientific journal)
University of Turku in the BioNLP'11 Shared Task (2012)
- BMC Bioinformatics
Björne J, Ginter F, Salakoski T
(A1 Refereed original research article in a scientific journal)
Wrapper-based selection of genetic features in genome-wide association studies through fast matrix operations (2012)
- Algorithms for Molecular Biology
Pahikkala T, Okser S, Airola A, Salakoski T, Aittokallio T
(A1 Refereed original research article in a scientific journal)
A Dependency-based Analysis of Treebank Annotation Errors (2011) Proceedings of International Conference on Dependency Linguistics (Depling'11), Barcelona, Spain Haverinen K, Ginter F, Laippala V, Kohonen S, Viljanen T, Nyblom J, Salakoski T
(A4 Refereed article in a conference publication )
A Machine Learning Model and Evaluation of Text Mining for Protein Function Prediction (2011) Björne Jari, Salakoski Tapio
(A4 Refereed article in a conference publication )
An experimental comparison of cross-validation techniques for estimating the area under the ROC curve (2011)
- Computational Statistics and Data Analysis
Airola A, Pahikkala T, Waegeman W, De Baets B, Salakoski T
(A1 Refereed original research article in a scientific journal)
An Improved Training Algorithm for the Linear Ranking Support Vector Machine (2011)
- Lecture Notes in Computer Science
Airola A, Pahikkala T, Salakoski T
(A4 Refereed article in a conference publication )
A parallel online regularized least-squares machine learning algorithm for future multi-core processors (2011) Proceedings of the 1st International Conference on Pervasive and Embedded Computing and Communication Systems (PECCS 2011) Pahikkala T, Airola A, Xu TC, Liljeberg P, Tenhunen H, Salakoski T
(A4 Refereed article in a conference publication )
Comparing the Collaborative and Independent Viewing of Program Visualizations (2011)
- Conference proceedings : Frontiers in Education Conference
Proceedings for FIE 2011 Conference Rajala T, Kaila E, Holvitie J, Haavisto R, Laakso MJ, Salakoski T
(A4 Refereed article in a conference publication )
Drug-Drug Interaction Extraction with RLS and SVM Classifiers (2011)
- CEUR Workshop Proceedings
Jari Björne, Antti Airola, Tapio Pahikkala, Tapio Salakoski
(A4 Refereed article in a conference publication )
EVEX: A PubMed-Scale Resource for Homology-Based Generalization of Text Mining Predictions (2011) Proceedings of BioNLP'11 Workshop Van Landeghem S, Ginter F, Peer Y, Salakoski T
(A4 Refereed article in a conference publication )
EXTRACTING CONTEXTUALIZED COMPLEX BIOLOGICAL EVENTS WITH RICH GRAPH-BASED FEATURE SETS (2011)
- Computational Intelligence
Bjorne J, Heimonen J, Ginter F, Airola A, Pahikkala T, Salakoski T
(A1 Refereed original research article in a scientific journal)
Fast and Parallelized Greedy Forward Selection of Genetic Variants in Genome-Wide Association Studies (2011) IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS 2011) Okser S, Pahikkala T, Airola A, Aittokallio T, Salakoski T
(A4 Refereed article in a conference publication )
Generalizing Biomedical Event Extraction (2011) Björne Jari, Salakoski Tapio
(A4 Refereed article in a conference publication )
Greedy Regularized Least-Squares for Multi-Task Learning (2011) 11th IEEE International Conference on Data Mining Workshops (ICDMW'11) Naula P, Pahikkala T, Airola A, Salakoski T
(A4 Refereed article in a conference publication )
Important features in program visualization (2011) Rajala Teemu, Kaila Erkki, Laakso Mikko-Jussi, Salakoski Tapio
(A4 Refereed article in a conference publication )