Pekka Ruusuvuori

- Associate Professor,
Institute of Biomedicine (Faculty of Medicine)

pekka.ruusuvuori@utu.fi

+358 29 450 2132

+358 50 472 1830

Kiinamyllynkatu 10

Turku

Publications

2 of 3

STAGETOOL, a Novel Automated Approach for Mouse Testis Histological Analysis (2023)
- Endocrinology
Meikar Oliver, Majoral Daniel, Heikkinen Olli, Valkama Eero, Leskinen Sini, Rebane Ana, Ruusuvuori Pekka, Toppari Jorma, Mäkelä Juho-Antti, Kotaja Noora
(A1 Refereed original research article in a scientific journal)
The effect of neural network architecture on virtual H&E staining: Systematic assessment of histological feasibility (2023)
- Patterns
Khan Umair, Koivukoski Sonja, Valkonen Mira, Latonen Leena, Ruusuvuori Pekka
(A1 Refereed original research article in a scientific journal)
(2023)
- Laboratory Investigation
Koivukoski Sonja, Khan Umair, Ruusuvuori Pekka, Latonen Leena
(A1 Refereed original research article in a scientific journal)
Artificial intelligence for diagnosis and Gleason grading of prostate cancer: the PANDA challenge (2022)
- Nature MedicineApplied Sciences
Bulten Wouter, Kartasalo Kimmo, Chen Po-Hsuan Cameron, Ström Peter, Pinckaers Hans, Nagpal Kunal, Cai Yuannan, Steiner David F., van Boven Hester, Vink Robert, Hulsbergen-van de Kaa Christina, van der Laak Jeroen, Amin Mahul B., Evans Andrew J., van der Kwast Theodorus, Allan Robert, Humphrey Peter A., Grönberg Henrik, Samaratunga Hemamali, Delahunt Brett, Tsuzuki Toyonori, Häkkinen Tomi, Egevad Lars, Demkin Maggie, Dane Sohier, Tan Fraser, Valkonen Masi, Corrado Greg S., Peng Lily, Mermel Craig H., Ruusuvuori Pekka, Litjens Geert, Eklund Martin, the PANDA challenge consortium
(A1 Refereed original research article in a scientific journal)
Detection of perineural invasion in prostate needle biopsies with deep neural networks (2022)
- Virchows ArchivOncogenesis
Kartasalo Kimmo, Ström Peter, Ruusuvuori Pekka, Samaratunga Hemamali, Delahunt Brett, Tsuzuki Toyonori, Eklund Martin, Egevad Lars
(A1 Refereed original research article in a scientific journal)
Estimating diagnostic uncertainty in artificial intelligence assisted pathology using conformal predictionParametric modeling in biomedical image synthesis2022
- Nature Communications
Olsson Henrik, Kartasalo Kimmo, Mulliqi Nita, Capuccini Marco, Ruusuvuori Pekka, Samaratunga Hemamali, Delahunt Brett, Lindskog Cecilia, Janssen Emiel A.M., Blilie Anders, Egevad Lars, Spjuth Ola, Eklund Martin
(A1 Refereed original research article in a scientific journal)
H&E Multi-Laboratory Staining Variance Exploration with Machine Learning (2022)
Prezja Fabi, Polonen Ilkka, Ayramo Sami, Ruusuvuori Pekka, Kuopio Teijo
(A1 Refereed original research article in a scientific journal)
miR-32 promotes MYC-driven prostate cancer (2022)
Scaravilli Mauro, Koivukoski Sonja, Gillen Andrew, Bouazza Aya, Ruusuvuori Pekka, Visakorpi Tapio, Latonen Leena
(A1 Refereed original research article in a scientific journal)
(2022) Biomedical Image Synthesis and Simulation: Methods and Applications Ruusuvuori Pekka
(A3 Refereed book chapter or chapter in a compilation book)
(2022)
- Heliyon
Ruusuvuori Pekka, Valkonen Masi, Kartasalo Kimmo, Valkonen Mira, Visakorpi Tapio, Nykter Mira, Latonen Leena
(A1 Refereed original research article in a scientific journal)
Artificial Intelligence for Diagnosis and Gleason Grading of Prostate Cancer in Biopsies-Current Status and Next Steps (2021)
- European Urology Focus
Kartasalo Kimmo, Bulten Wouter, Delahunt Brett, Chen Po-Hsuan Cameron, Pinckaers Hans, Olsson Henrik, Ji Xiaoyi, Mulliqi Nita, Samaratunga Hemamali, Tsuzuki Toyonori, Lindberg Johan, Rantalainen Mattias, Wählby Carolina, Litjens Geert, Ruusuvuori Pekka, Egevad Lars, Eklund Martin
(A2 Refereed review article in a scientific journal )
Building a central repository landmarks a new era for artificial intelligence-assisted digital pathology development in Europe (2021)
- European Journal of CancerBioinformatics
Latonen Leena, Ruusuvuori Pekka
(B1 Non-refereed article in a scientific journal)
Convolutional Neural Network-Based Artificial Intelligence for Classification of Protein Localization Patterns (2021)
- BiomoleculesCancer Research
Liimatainen Kaisa, Huttunen Riku, Latonen Leena, Ruusuvuori Pekka
(A1 Refereed original research article in a scientific journal)
(2021)
- IEEE Journal of Biomedical and Health InformaticsPathology
Valkonen Mira, Högnäs Gunilla, Bova G Steven, Ruusuvuori Pekka
(A1 Refereed original research article in a scientific journal)
Interobserver reproducibility of perineural invasion of prostatic adenocarcinoma in needle biopsies (2021)
- Virchows Archiv
Egevad Lars, Delahunt Brett, Samaratunga Hemamali, Tsuzuki Toyonori, Olsson Henrik, Ström Peter, Lindskog Cecilia, Häkkinen Tomi, Kartasalo Kimmo, Eklund Martin, Ruusuvuori Pekka
(A1 Refereed original research article in a scientific journal)
OpenPhi: an interface to access Philips iSyntax whole slide images for computational pathology (2021)
Mulliqi Nita, Kartasalo Kimmo, Olsson Henrik, Ji Xiaoyi, Egevad Lars, Eklund Martin, Ruusuvuori Pekka
(B1 Non-refereed article in a scientific journal)
Predicting Molecular Phenotypes from Histopathology Images: A Transcriptome-Wide Expression-Morphology Analysis in Breast Cancer (2021)
Wang Yinxi, Kartasalo Kimmo, Weitz Philippe, Acs Balazs, Valkonen Masi, Larsson Christer, Ruusuvuori Pekka, Hartman Johan, Rantalainen Mattias
(A1 Refereed original research article in a scientific journal)
The emerging role of artificial intelligence in the reporting of prostate pathology (2021)
Egevad Lars, Delahunt Brett, Samaratunga Hemamali, Tsuzuki Toyonori, Yamamoto Yoichiro, Yaxley John, Ruusuvuori Pekka, Kartasalo Kimmo, Eklund Martin
(B1 Non-refereed article in a scientific journal)
Virtual reality for 3D histology: multi-scale visualization of organs with interactive feature exploration (2021)
- BMC Cancer
Liimatainen Kaisa, Latonen Leena, Valkonen Masi, Kartasalo Kimmo, Ruusuvuori Pekka
(A1 Refereed original research article in a scientific journal)
ANHIR: Automatic Non-Rigid Histological Image Registration Challenge (2020)
- IEEE Transactions on Medical Imaging
Borovec J, Kybic J, Arganda-Carreras I, Sorokin DV, Bueno G, Khvostikov AV, Bakas S, Chang EIC, Heldmann S, Kartasalo K, Latonen L, Lotz J, Noga M, Pati S, Punithakumar K, Ruusuvuori P, Skalski A, Tahmasebi N, Valkonen M, Venet L, Wang YZ, Weiss N, Wodzinski M, Xiang Y, Xu Y, Yan Y, Yushkevich P, Zhao SY, Munoz-Barrutia A, Munoz-Barrutia A
(A1 Refereed original research article in a scientific journal)