A2 Refereed review article in a scientific journal

Virtual staining for histology by deep learning




AuthorsLatonen, Leena; Koivukoski, Sonja; Khan, Umair; Ruusuvuori, Pekka

PublisherCell Press

Publication year2024

JournalTrends in Biotechnology

Journal name in sourceTrends in Biotechnology

Volume42

Issue9

First page 1177

Last page1191

ISSN0167-7799

eISSN1879-3096

DOIhttps://doi.org/10.1016/j.tibtech.2024.02.009

Web address https://doi.org/10.1016/j.tibtech.2024.02.009

Self-archived copy’s web addresshttps://research.utu.fi/converis/portal/detail/Publication/387296210


Abstract

In pathology and biomedical research, histology is the cornerstone method for tissue analysis. Currently, the histological workflow consumes plenty of chemicals, water, and time for staining procedures. Deep learning is now enabling digital replacement of parts of the histological staining procedure. In virtual staining, histological stains are created by training neural networks to produce stained images from an unstained tissue image, or through transferring information from one stain to another. These technical innovations provide more sustainable, rapid, and cost-effective alternatives to traditional histological pipelines, but their development is in an early phase and requires rigorous validation. In this review we cover the basic concepts of virtual staining for histology and provide future insights into the utilization of artificial intelligence (AI)-enabled virtual histology.


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Funding information in the publication
The research of the authors is supported by the Research Council of Finland (357490 and 359230 to L.L., and 341967 and 359229 to P.R.) , European Research Area (ERA) PerMed (L.L. and P.R.) , Cancer Foundation Finland (L.L. and P.R.) , Emil Aaltosen Saeaetioe (S.K.) , and the University of Turku Graduate School (U.K.) .


Last updated on 2024-28-11 at 12:15