PhD, Docent Manu Tamminen - UTU Research Portal

Manu Tamminen
PhD, Docent

- Academy Research Fellow,
Physiology and Genetics (Department of Biology)
- Docent,
Department of Biology (Faculty of Science)

manu.tamminen@utu.fi

Office: 312

ORCID identifier: https://orcid.org/0000-0001-5891-7653(external)

Research pages(external)

Researchgate(external)

Google Scholar(external)

Areas of expertise

Molecular biology, Bioinformatics, Microbial Genetics, Microbial Ecology

Biography

MSc, University of Turku, 2002
PhD, University of Helsinki, 2011
Post-doc, MIT, 2011-2013
Post-doc, ETH Zürich, 2014-2017
Adjunct professor, University of Turku, 2017
Senior lecturer, University of Turku, 2017-

Research

Single cell genomics of bacteria and small eukaryotes
Horizontal transfer of antibiotic resistance genes
Quantitative applications of NGS

Teaching

SOMO1021 - Advanced genetics (2018)
FYGE2242 - Laboratory course of microbial genetics (2018)
BIOL1301 - Fundamentals of genetics (2018)
FYGE 4031 - Laboratory methods in genetics (2018)
BIOL3050 - Bioinformatics for biologists (2019)
BIOL3200 - BSc seminars (2019)
BIOL1301 - Fundamentals of genetics (2019)
FYGE 4031 - Laboratory methods in genetics (2019)

Publications

2 of 2

2018
- Canadian Journal of Microbiology
Rinta-Kanto J., Pehkonen K., Sinkko H., Tamminen M., Timonen S.
(A1 Refereed original research article in a scientific journal)
Construction and Characterization of Synthetic Bacterial Community for Experimental Ecology and Evolution (2018)
- Frontiers in GeneticsNature
Cairns J, Jokela R, Hultman J, Tamminen M, Virta M, Hiltunen T
(A1 Refereed original research article in a scientific journal)
Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes (2018)
- Communications BiologyTiedepolitiikka
Cairns Johannes, Ruokolainen Lasse, Hultman Jenni, Tamminen Manu, Virta Marko, Hiltunen Teppo
(A1 Refereed original research article in a scientific journal)
Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent (2018)
- FEMS Microbiology EcologyISME Journal
Jenni Hultman, Manu Tamminen, Katariina Pärnänen, Johannes Cairns, Antti Karkman, Marko Virta
(A1 Refereed original research article in a scientific journal)
Proteome evolution under non-substitutable resource limitation (2018)
- Nature Communications
Tamminen M, Betz A, Pereira AL, Thali M, Matthews B, Suter MJ, Narwani A
(A1 Refereed original research article in a scientific journal)
Corrigendum: Mobile genes in the human microbiome are structured from global to individual scales (vol 535, pg 435, 2016) (2017)
Brito IL, Yilmaz S, Huang K, Xu L, Jupiter SD, Jenkins AP, Naisilisili W, Tamminen M, Smillie CS, Wortman JR, Birren BW, Xavier RJ, Blainey PC, Singh AK, Gevers D, Alm EJ
(Other publication)
Innovaatiota eurooppalaisittain ja amerikkalaisittain (2017)
Manu Tamminen
(B1 Non-refereed article in a scientific journal)
Single-cell mass spectrometry reveals the importance of genetic diversity and plasticity for phenotypic variation in nitrogen-limited Chlamydomonas (2017)
Krismer J, Tamminen M, Fontana S, Zenobi R, Narwani A
(A1 Refereed original research article in a scientific journal)
(2016)
- Scientific Reports
Parnanen K, Karkman A, Tamminen M, Lyra C, Hultman J, Paulin L, Virta M
(A1 Refereed original research article in a scientific journal)