A1 Refereed original research article in a scientific journal

BODIL: a molecular modeling environment for structure-function analysis and drug design




AuthorsLehtonen, J.V., Still, D.J., Rantanen, V.V., Ekholm, J., Björklund, D., Iftikhar, Z., Huhtala, M., Repo, S., Jussila, A., Jaakkola, J. and Pentikäinen, O.

PublisherKluwer Academic Publishers

Publishing placeNetherlands

Publication year2004

Journal acronymJournal of computer-aided molecular design

Volume18

Issue6

First page 401

Last page4019

eISSN1573-4951

DOIhttps://doi.org/10.1007/s10822-004-3752-4

Web address https://link.springer.com/content/pdf/10.1007/s10822-004-3752-4.pdf


Abstract

BODIL is a molecular modeling environment geared to help the user to quickly identify key features of proteins critical to molecular recognition, especially (1) in drug discovery applications, and (2) to understand the structural basis for function. The program incorporates state-of-the-art graphics, sequence and structural alignment methods, among other capabilities needed in modern structure–function–drug target research. BODIL has a flexible design that allows on-the-fly incorporation of new modules, has intelligent memory management, and fast multi-view graphics. A beta version of BODIL and an accompanying tutorial are available at http://www.abo.fi/fak/mnf/bkf/research/johnson/bodil.html



Last updated on 2024-26-11 at 22:33