A1 Refereed original research article in a scientific journal
Neural network assessment of aortic, iliac, renal, and mesenteric artery calcification in CTA: Normalized scoring framework and comparison to threshold-based method
Authors: Halkoaho, Johannes; Niiranen, Oskari; Kaseva, Tuomas; Ruohola, Arttu; Salli, Eero; Savolainen, Sauli; Hakovirta, Harri; Kangasniemi, Marko
Publisher: SAGE Publications
Publication year: 2026
Journal: Acta Radiologica Open
Volume: 15
Issue: 3
ISSN: 2058-4601
eISSN: 2058-4601
DOI: https://doi.org/10.1177/20584601261431608
Publication's open availability at the time of reporting: Open Access
Publication channel's open availability : Open Access publication channel
Web address : https://doi.org/10.1177/20584601261431608
Self-archived copy’s web address: https://research.utu.fi/converis/portal/detail/Publication/515890272
Self-archived copy's licence: CC BY
Self-archived copy's version: Publisher`s PDF
Background: Calcification of abdominal arteries is an important risk marker in vascular disease. Automated, objective quantification methods could improve reproducibility and reduce observer dependency in clinical practice.
Purpose: To develop and evaluate a deep learning method for quantifying abdominal arterial calcification from contrast-enhanced CT angiography (CTA).
Material and methods: We retrospectively collected 223 CTA volumes, divided into 147 training and 76 test cases. Ground truth calcification segmentations were manually annotated, while vessel segmentations were generated by a previously trained neural network and manually refined. Two nnU-Net models were trained, one for artery segmentation and one for calcification segmentation. Renal, mesenteric, and common iliac arteries were shortened algorithmically. Performance of the models was evaluated using Dice score, volumetric similarity, sensitivity, precision, and Jaccard index. Calcification burden was defined as the ratio of calcified volume to artery volume. The amount and the average size of calcification clusters were investigated. The performance of the method was benchmarked against an idealized threshold-based approach and a more clinically realistic approach.
Results: The neural network achieved performance comparable to the optimized threshold-based method, with slight improvements across several segmentation metrics. Dice scores and volumetric similarity demonstrated reliable vessel and calcification detection. The predicted calcification burden score showed high correlation with the ground truth calcification burden score.
Conclusion: The proposed deep learning tool enables fast, reproducible, and observer-independent quantification of calcification in major abdominal vessels, offering a practical alternative to manual or threshold-based scoring methods.
Downloadable publication This is an electronic reprint of the original article. |
Funding information in the publication:
The authors disclosed receipt of the following financial support for the research, authorship, and/or publication of this article: This study received funding from Helsinki University Hospital (MK: TYH2024228, M780025014) along with Federal Grant Satasairaala and Finnish Culture Foundation Satakunta fund (grant numbers: 75212239 and 7522150).