A1 Refereed original research article in a scientific journal

The δ subunit and NTPase HelD institute a two-pronged mechanism for RNA polymerase recycling




AuthorsPei, H.-H., Hilal, T., Chen, Z.A., Huang, Y.-H., Gao, Y., Said, N., Loll, B., Rappsilber, J., Belogurov, G.A., Artsimovitch, I., Wahl, M.C.

PublisherNature Research

Publication year2020

JournalNature Communications

Journal name in sourceNature Communications

Article number6418

Volume11

Issue1

Number of pages14

ISSN2041-1723

eISSN2041-1723

DOIhttps://doi.org/10.1038/s41467-020-20159-3

Web address https://doi.org/10.1038/s41467-020-20159-3

Self-archived copy’s web addresshttps://research.utu.fi/converis/portal/detail/Publication/51457327


Abstract

Cellular RNA polymerases (RNAPs) can become trapped on DNA or RNA, threatening genome stability and limiting free enzyme pools, but how RNAP recycling into active states is achieved remains elusive. In Bacillus subtilis, the RNAP δ subunit and NTPase HelD have been implicated in RNAP recycling. We structurally analyzed Bacillus subtilis RNAP-δ-HelD complexes. HelD has two long arms: a Gre cleavage factor-like coiled-coil inserts deep into the RNAP secondary channel, dismantling the active site and displacing RNA, while a unique helical protrusion inserts into the main channel, prying the β and β′ subunits apart and, aided by δ, dislodging DNA. RNAP is recycled when, after releasing trapped nucleic acids, HelD dissociates from the enzyme in an ATP-dependent manner. HelD abundance during slow growth and a dimeric (RNAP-δ-HelD)2 structure that resembles hibernating eukaryotic RNAP I suggest that HelD might also modulate active enzyme pools in response to cellular cues.


Downloadable publication

This is an electronic reprint of the original article.
This reprint may differ from the original in pagination and typographic detail. Please cite the original version.





Last updated on 2024-26-11 at 17:31