A1 Refereed original research article in a scientific journal
The δ subunit and NTPase HelD institute a two-pronged mechanism for RNA polymerase recycling
Authors: Pei, H.-H., Hilal, T., Chen, Z.A., Huang, Y.-H., Gao, Y., Said, N., Loll, B., Rappsilber, J., Belogurov, G.A., Artsimovitch, I., Wahl, M.C.
Publisher: Nature Research
Publication year: 2020
Journal: Nature Communications
Journal name in source: Nature Communications
Article number: 6418
Volume: 11
Issue: 1
Number of pages: 14
ISSN: 2041-1723
eISSN: 2041-1723
DOI: https://doi.org/10.1038/s41467-020-20159-3
Web address : https://doi.org/10.1038/s41467-020-20159-3
Self-archived copy’s web address: https://research.utu.fi/converis/portal/detail/Publication/51457327
Cellular RNA polymerases (RNAPs) can become trapped on DNA or RNA, threatening genome stability and limiting free enzyme pools, but how RNAP recycling into active states is achieved remains elusive. In Bacillus subtilis, the RNAP δ subunit and NTPase HelD have been implicated in RNAP recycling. We structurally analyzed Bacillus subtilis RNAP-δ-HelD complexes. HelD has two long arms: a Gre cleavage factor-like coiled-coil inserts deep into the RNAP secondary channel, dismantling the active site and displacing RNA, while a unique helical protrusion inserts into the main channel, prying the β and β′ subunits apart and, aided by δ, dislodging DNA. RNAP is recycled when, after releasing trapped nucleic acids, HelD dissociates from the enzyme in an ATP-dependent manner. HelD abundance during slow growth and a dimeric (RNAP-δ-HelD)2 structure that resembles hibernating eukaryotic RNAP I suggest that HelD might also modulate active enzyme pools in response to cellular cues.
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