A1 Refereed original research article in a scientific journal

Brain plasticity and neuroinflammatory protein biomarkers with circulating MicroRNAs as predictors of acute brain injury outcome – A prospective cohort study




AuthorsSajanti, Antti; Li, Yan; Hellström, Santtu; Cao, Ying; Girard, Romuald; Umemori, Juzoh; Frantzén, Janek; Koskimäki, Fredrika; Lyne, Seán B.; Falter, Johannes; Rantamäki, Tomi; Takala, Riikka; Posti, Jussi P.; Roine, Susanna; Kolehmainen, Sulo; Srinath, Abhinav; Jänkälä, Miro; Puolitaival, Jukka; Rahi, Melissa; Rinne, Jaakko; Castrén, Eero; Koskimäki, Janne

PublisherElsevier BV

Publication year2024

JournalJournal of the Neurological Sciences

Journal name in sourceJournal of the Neurological Sciences

Article number123169

Volume464

ISSN0022-510X

eISSN1878-5883

DOIhttps://doi.org/10.1016/j.jns.2024.123169

Web address https://doi.org/10.1016/j.jns.2024.123169

Self-archived copy’s web addresshttps://research.utu.fi/converis/portal/detail/Publication/457506147


Abstract
Background

Brain recovery mechanisms after injuries like aneurysmal subarachnoid hemorrhage (aSAH), ischemic stroke (IS), and traumatic brain injury (TBI) involve brain plasticity, synaptic regeneration, and neuroinflammation. We hypothesized that serum levels of the p75 neurotrophic receptor (p75NTR) and associated signaling proteins, as well as differentially expressed (DE) microRNAs, could predict recovery outcomes irrespective of injury type.

Methods

A prospective patient cohort with ischemic stroke (IS, n = 30), aneurysmal subarachnoid hemorrhage (aSAH, n = 31), and traumatic brain injury (TBI, n = 13) were evaluated (total n = 74). Serum samples were collected at two post-injury intervals (early: 1–3 days, late: 4–8 days), and outcomes were assessed after three months using the modified Rankin Scale (mRS), categorizing outcomes as favorable (mRS 0–3) or unfavorable (mRS 4–6). Six proteins were measured using ELISAs: p75NTR, NGF, sortilin, IL1β, TNFα, and cyclophilin. DE microRNAs were identified using DESeq2, and their target genes were predicted. Serum molecules between patients with differing outcomes were compared using a Kolmogorov-Smirnov test, 2-tailed t-test and multivariate linear discriminant analysis (LDA).

Results

Favorable (n = 46) and unfavorable (n = 28) outcome cohorts were balanced with age and sex (p = 0.25 and 0.63). None of the studied proteins correlated with age. Combinatory LDA of the six protein biomarkers indicated strong prognostic value for favorable outcomes (OR 2.09; AUC = 70.3%, p = 0.0058). MicroRNA expression changes over time were identified in the aSAH, TBI, and IS groups (p < 0.05, FDR corrected). Twenty-three microRNAs were commonly DE across all brain injury groups when comparing favorable and unfavorable outcomes (p < 0.05). LDA of four microRNAs targeting the studied proteins showed high prognostic accuracy (OR 11.7; AUC = 94.1%, p = 0.016).

Conclusions

The combined prognostic microRNA and protein biomarker models demonstrated accurate outcome prognostication across diverse injury types, implying the presence of a common recovery mechanism. DE microRNAs were found to target the studied molecules, suggesting a potential mechanistic role in recovery. Further investigation is warranted to study these molecules in prognostication, as well as therapeutic targets for enhancing recovery.


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Funding information in the publication
This study was supported by the Finnish Functional Genomics Centre, University of Turku , and Åbo Akademi and Biocenter Finland.


Last updated on 2025-27-01 at 19:57