A1 Refereed original research article in a scientific journal
Detection of human rhinoviruses by reverse transcription strand invasion based amplification method (RT-SIBA)
Authors: Kainulainen V, Elf S, Susi P, Mäki M, Pitkäranta A, Koskinen JO, Korpela R, Eboigbodin KE
Publication year: 2019
Journal:Journal of Virological Methods
Journal name in sourceJournal of virological methods
Journal acronym: J Virol Methods
Volume: 263
First page : 75
Last page: 80
Number of pages: 6
ISSN: 0166-0934
eISSN: 1879-0984
DOI: https://doi.org/10.1016/j.jviromet.2018.10.015
Self-archived copy’s web address: https://research.utu.fi/converis/portal/detail/Publication/37046729
Background: Rhinovirus (RV), a major
 cause of respiratory infection in humans, imposes an enormous economic 
burden due to the direct and indirect costs associated with the illness.
 Accurate and timely diagnosis is crucial for deciding the appropriate 
clinical approach and minimizing unnecessary prescription of 
antibiotics. Diagnosis of RV is extremely challenging due to genetic and
 serological variability among its numerous types and their similarity 
to enteroviruses.
Objective: We sought to develop a 
rapid nucleic acid test that can be used for the detection of Rhinovirus
 within both laboratory and near patient settings.
Study
 design: We developed and evaluated a novel isothermal nucleic acid 
amplification method called Reverse Transcription Strand Invasion-Based 
Amplification (RT-SIBA) to rapidly detect Rhinovirus from clinical 
specimens.
Result: The method, RT-SIBA, detected RV 
in clinical specimens with high analytical sensitivity (96%) and 
specificity (100%). The time to positive result was significantly 
shorter for the RV RT-SIBA assay than for a reference RV nucleic acid 
amplification method (RT-qPCR).
Conclusion: The 
rapid detection time of the RV SIBA assay, as well as its compatibility 
with portable instruments, will facilitate prompt diagnosis of infection
 and thereby improve patient care.
| Downloadable publication  This is an electronic reprint of the original article. | 

