Analyzing Th17 cell differentiation dynamics using a novel integrative modeling framework for time-course RNA sequencing data
: Intosalmi J, Ahlfors H, Rautio S, Mannerstom H, Chen ZJ, Lahesmaa R, Stockinger B, Lahdesmaki H
Publisher: BIOMED CENTRAL LTD
: 2015
: BMC Systems Biology
: BMC SYSTEMS BIOLOGY
: BMC SYST BIOL
: ARTN 81
: 9
: 12
: 1752-0509
DOI: https://doi.org/10.1186/s12918-015-0223-6
Conclusions: Our results show significant evidence, for instance, for inhibitory mechanisms between the transcription factors and reveal a previously unknown dependency between the dosage of the inducing cytokine TGFa and the expression of the master regulator of competing (induced) regulatory T cell lineage. Further, our experimental validation approves this dependency in Th17 polarizing conditions.