A1 Refereed original research article in a scientific journal

Estimating diagnostic uncertainty in artificial intelligence assisted pathology using conformal prediction




AuthorsOlsson Henrik, Kartasalo Kimmo, Mulliqi Nita, Capuccini Marco, Ruusuvuori Pekka, Samaratunga Hemamali, Delahunt Brett, Lindskog Cecilia, Janssen Emiel A.M., Blilie Anders, Egevad Lars, Spjuth Ola, Eklund Martin

PublisherNature Research

Publication year2022

JournalNature Communications

Journal name in sourceNature Communications

Article number7761

Volume13

Issue1

ISSN2041-1723

eISSN2041-1723

DOIhttps://doi.org/10.1038/s41467-022-34945-8

Web address https://www.nature.com/articles/s41467-022-34945-8

Self-archived copy’s web addresshttps://research.utu.fi/converis/portal/detail/Publication/178434671


Abstract

Unreliable predictions can occur when an artificial intelligence (AI) system is presented with data it has not been exposed to during training. We demonstrate the use of conformal prediction to detect unreliable predictions, using histopathological diagnosis and grading of prostate biopsies as example. We digitized 7788 prostate biopsies from 1192 men in the STHLM3 diagnostic study, used for training, and 3059 biopsies from 676 men used for testing. With conformal prediction, 1 in 794 (0.1%) predictions is incorrect for cancer diagnosis (compared to 14 errors [2%] without conformal prediction) while 175 (22%) of the predictions are flagged as unreliable when the AI-system is presented with new data from the same lab and scanner that it was trained on. Conformal prediction could with small samples (N = 49 for external scanner, N = 10 for external lab and scanner, and N = 12 for external lab, scanner and pathology assessment) detect systematic differences in external data leading to worse predictive performance. The AI-system with conformal prediction commits 3 (2%) errors for cancer detection in cases of atypical prostate tissue compared to 44 (25%) without conformal prediction, while the system flags 143 (80%) unreliable predictions. We conclude that conformal prediction can increase patient safety of AI-systems.


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Last updated on 2025-27-03 at 21:51