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Comparison of Word and Character Level Information for Medical Term Identification Using Convolutional Neural Networks and Transformers




TekijätSeneviratne Sandaru, Lenskiy Artem, Nolan Christopher, Daskalaki Eleni, Suominen Hanna

ToimittajaMichelle Honey, Charlene Ronquillo, Ting-Ting Lee, Lucy Westbrooke

Konferenssin vakiintunut nimiInternational Congress in Nursing Informatics

Julkaisuvuosi2021

JournalStudies in Health Technology and Informatics

Kokoomateoksen nimiNurses and Midwives in the Digital Age: Selected Papers, Posters and Panels from the 15th International Congress in Nursing Informatics

Tietokannassa oleva lehden nimiStudies in health technology and informatics

Lehden akronyymiStud Health Technol Inform

Sarjan nimiStudies in Health Technology and Informatics

Vuosikerta284

Aloitussivu249

Lopetussivu253

ISSN0926-9630

eISSN1879-8365

DOIhttps://doi.org/10.3233/SHTI210717

Verkko-osoitehttps://ebooks.iospress.nl/doi/10.3233/SHTI210717

Rinnakkaistallenteen osoitehttps://research.utu.fi/converis/portal/detail/Publication/176265377


Tiivistelmä
Complexity and domain-specificity make medical text hard to understand for patients and their next of kin. To simplify such text, this paper explored how word and character level information can be leveraged to identify medical terms when training data is limited. We created a dataset of medical and general terms using the Human Disease Ontology from BioPortal and Wikipedia pages. Our results from 10-fold cross validation indicated that convolutional neural networks (CNNs) and transformers perform competitively. The best F score of 93.9% was achieved by a CNN trained on both word and character level embeddings. Statistical significance tests demonstrated that general word embeddings provide rich word representations for medical term identification. Consequently, focusing on words is favorable for medical term identification if using deep learning architectures.

Ladattava julkaisu

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Last updated on 2024-26-11 at 15:30