Antti Hakanen - UTU Research Portal

Antti Hakanen

- Docent,
Institute of Biomedicine (Faculty of Medicine)

anthak@utu.fi

+358 50 400 8382

Kiinamyllynkatu 13

Turku

Publications

1 of 4

Uncomplicated and Complicated Acute Appendicitis Induce Different Cytokine PatternsBlood culture positivity in patients with acute appendicitis: A propensity score-matched prospective cohort study (2026)
- APMIS
Han, Tatu; Borman, Tuomas; Vanhatalo, Sanja; Lahti, Leo; Löyttyniemi, Eliisa; Hurme, Saija; Munukka, Eveliina; Kallonen, Teemu; Hakanen, Antti; Hollmén, Maija; Salminen, Paulina
(A1 Refereed original research article in a scientific journal)
Antimicrobial resistance trends of Escherichia coli and Staphylococcus aureus isolated from clinical blood cultures in Namibia: a nine-year (2011-2019) retrospective study (2025)
- BMC Infectious DiseasesBMJ Open Gastroenterology
Haindongo, Erastus Hanganeni H.; Hakanen, Antti J.; Vainio, Olli; Vuopio, Jaana; Hedimbi, Marius
(A1 Refereed original research article in a scientific journal)
Large-scale genome-wide analyses with proteomics integration reveal novel loci and biological insights into frailty (2025)
- Nature AgingAntimicrobial resistance & infection control
Mak, Jonathan K. L.; Qin, Chenxi; Krüger, Moritz; Kuukka, Anna; FinnGen; Hägg, Sara; Lin, Jake; Jylhävä, Juulia
(A1 Refereed original research article in a scientific journal)
Mikrobikeskus tutkii tulevaisuuden terveysuhkia ja hyötyjäAppendiceal microbiome in uncomplicated and complicated acute appendicitis: A prospective cohort study (2025)
- Turun SanomatInternational Journal of Immunogenetics
Hakanen, Antti; Hytönen, Jukka
(E1 Popularised article)
Nalidixic acid-a good marker of fluoroquinolone resistance mechanisms in Escherichia coli (2025)
- Microbiology spectrumScandinavian Journal of Surgery
Kalinen, Sofia; Kallio, Heini; Kallonen, Teemu; Knaapila, Juha; Lamminen, Tarja; Huovinen, Pentti; Boström, Peter; Hakanen, Antti J.; Gunell, Marianne
(A1 Refereed original research article in a scientific journal)
Viral acute respiratory illnesses in elite athletes: A 12-month controlled follow-up studyExternal quality assessment of SARS-CoV-2-sequencing: An ESGMD-SSM pilot trial across 15 European laboratories (2025)
- PLoS ONE
Luoto, Raakel; Laatikainen-Raussi, Vesa; Mjøsund, Katja E.; Valtonen, Maarit; Uhari, Matti; Ihalainen, Johanna K.; Vuorinen, Tytti; Hakanen, Antti; Waris, Matti; Heinonen, Olli J.; Ruuskanen, Olli
(A1 Refereed original research article in a scientific journal)
Appendicolith classification: physical and chemical properties of appendicoliths in patients with CT diagnosed acute appendicitis - a prospective cohort study (2024)
Vanhatalo, Sanja; Mäkilä, Ermei; Hakanen, Antti J.; Munukka, Eveliina; Salonen, Jarno; Saarinen, Timo; Grönroos, Juha; Sippola, Suvi; Salminen, Paulina
(A1 Refereed original research article in a scientific journal)
Bioinformatiikka bakteriologiassa - lupauksia ja haasteita (2024)
- Duodecim
Kallonen, Teemu; Hakanen, Antti
(A2 Refereed review article in a scientific journal )
Differences in Gut Microbiota Profiles and Microbiota Steroid Hormone Biosynthesis in Men with and Without Prostate Cancer (2024)
- European Urology Open ScienceJournal of Global Antimicrobial Resistance
Kalinen, Sofia; Kallonen, Teemu; Gunell, Marianne; Ettala, Otto; Jambor, Ivan; Knaapila, Juha; Syvänen, Kari T.; Taimen, Pekka; Poutanen, Matti; Aronen, Hannu J.; Ollila, Helena; Pietilä, Sami; Elo, Laura L.; Lamminen, Tarja; Hakanen, Antti J.; Munukka, Eveliina; Boström, Peter J.; the Multi-IMPROD Study Group
(A1 Refereed original research article in a scientific journal)
Genetic polymorphisms of TLR1, TLR2, TLR3 and TLR4 in patients with recurrent or severe infections (2024)
Teräsjärvi Johanna, Kainulainen Leena, Peltola Ville, Mertsola Jussi, Hakanen Antti, He Qiushui
(A1 Refereed original research article in a scientific journal)
High-throughput DNA extraction strategy for fecal microbiome studies (2024)
- Microbiology spectrumMicrobiology spectrum
Isokääntä, Heidi; Tomnikov, Natalie; Vanhatalo, Sanja; Munukka, Eveliina; Huovinen, Pentti; Hakanen, Antti J.; Kallonen, Teemu
(A1 Refereed original research article in a scientific journal)
Impact of the COVID-19 pandemic on extended-spectrum β-lactamase producing Escherichia coli in urinary tract and blood stream infections : results from a nationwide surveillance network, Finland, 2018 to 2022 (2024)
- Antimicrobial resistance & infection control
Ilmavirta, Heikki; Ollgren, Jukka; Räisänen, Kati; Kinnunen, Tuure; Hakanen, Antti Juhani; Rantakokko-Jalava, Kaisu; Jalava, Jari; Lyytikäinen, Outi
(A1 Refereed original research article in a scientific journal)
Antimicrobial resistance prevalence of Escherichia coli and Staphylococcus aureus amongst bacteremic patients in Africa: a systematic review (2023)
Haindongo Erastus Hanganeni, Ndakolo Diana, Hedimbi Marius, Vainio Olli, Hakanen Antti, Vuopio Jaana
(A2 Refereed review article in a scientific journal )
Diagnostic Performance and Tolerability of Saliva and Nasopharyngeal Swab Specimens in the Detection of SARS-CoV-2 by RT-PCRIncreasing proportions of extended-spectrum β-lactamase-producing isolates among Escherichia coli from urine and bloodstream infections: results from a nationwide surveillance network, Finland, 2008 to 2019 (2023)
Ahti Jaakko, Österback Riikka, Keskitalo Anniina, Mokkala Kati, Vidbäck Siina, Veikkolainen Ville, Vuorinen Tytti, Peltola Ville, Hakanen Antti J, Waris Matti, Laine Miia
(A1 Refereed original research article in a scientific journal)
FinnGen provides genetic insights from a well-phenotyped isolated population (2023)
- Nature
Kurki Mitja I., Karjalainen Juha, Palta Priit, Sipilä Timo P., Kristiansson Kati, Donner Kati M., Reeve Mary P., Laivuori Hannele, Aavikko Mervi, Kaunisto Mari A., Loukola Anu, Lahtela Elisa, Mattsson Hannele, Laiho Päivi, Parolo Pietro Della Briotta, Lehisto Arto A., Kanai Masahiro, Mars Nina, Rämö Joel, Kiiskinen Tuomo, Heyne Henrike O., Veerapen Kumar, Rüeger Sina, Lemmelä Susanna, Zhou Wei, Ruotsalainen Sanni, Pärn Kalle, Hiekkalinna Tero, Koskelainen Sami, Paajanen Teemu, Llorens Vincent, Gracia-Tabuenca Javier, Siirtola Harri, Reis Kadri, Elnahas Abdelrahman G., Sun Benjamin, Foley Christopher N., Aalto-Setälä Katriina, Alasoo Kaur, Arvas Mikko, Auro Kirsi, Biswas Shameek, Bizaki-Vallaskangas Argyro, Carpen Olli, Chen Chia-Yen, Dada Oluwaseun A., Ding Zhihao, Ehm Margaret G., Eklund Kari, Färkkilä Martti, Finucane Hilary, Ganna Andrea, Ghazal Awaisa, Graham Robert R., Green Eric M., Hakanen Antti, Hautalahti Marco, Hedman Åsa K., Hiltunen Mikko, Hinttala Reetta, Hovatta Iiris, Hu Xinli, Huertas-Vazquez Adriana, Huilaja Laura, Hunkapiller Julie, Jacob Howard, Jensen Jan-Nygaard, Joensuu Heikki, John Sally, Julkunen Valtteri, Jung Marc, Junttila Juhani, Kaarniranta Kai, Kähönen Mika, Kajanne Risto, Kallio Lila, Kälviäinen Reetta, Kaprio Jaakko, FinnGen, Kerimov Nurlan, Kettunen Johannes, Kilpeläinen Elina, Kilpi Terhi, Klinger Katherine, Kosma Veli-Matti, Kuopio Teijo, Kurra Venla, Laisk Triin, Laukkanen Jari, Lawless Nathan, Liu Aoxing, Longerich Simonne, Mägi Reedik, Mäkelä Johanna, Mäkitie Antti, Malarstig Anders, Mannermaa Arto, Maranville Joseph, Matakidou Athena, Meretoja Tuomo, Mozaffari Sahar V., Niemi Mari E. K., Niemi Marianna, Niiranen Teemu, O´Donnell Christopher J., Obeidat Ma´en, Okafo George, Ollila Hanna M., Palomäki Antti, Palotie Tuula, Partanen Jukka, Paul Dirk S., Pelkonen Margit, Pendergrass Rion K., Petrovski Slavé, Pitkäranta Anne, Platt Adam, Pulford David, Punkka Eero, Pussinen Pirkko, Raghavan Neha, Rahimov Fedik, Rajpal Deepak, Renaud Nicole A., Riley-Gillis Bridget, Rodosthenous Rodosthenis, Saarentaus Elmo, Salminen Aino, Salminen Eveliina, Salomaa Veikko, Schleutker Johanna, Serpi Raisa, Shen Huei-yi, Siegel Richard, Silander Kaisa, Siltanen Sanna, Soini Sirpa, Soininen Hilkka, Sul Jae Hoon, Tachmazidou Ioanna, Tasanen Kaisa, Tienari Pentti, Toppila-Salmi Sanna, Tukiainen Taru, Tuomi Tiinamaija, Turunen Joni A., Ulirsch Jacob C., Vaura Felix, Virolainen Petri, Waring Jeffrey, Waterworth Dawn, Yang Robert, Nelis Mari, Reigo Anu, Metspalu Andres, Milani Lili, Esko Tõnu, Fox Caroline, Havulinna Aki S., Perola Markus, Ripatti Samuli, Jalanko Anu, Laitinen Tarja, Mäkelä Tomi P., Plenge Robert, McCarthy Mark, Runz Heiko, Daly Mark J., Palotie Aarno
(A1 Refereed original research article in a scientific journal)
Antimicrobial resistance among bacteria isolated from urinary tract infections in females in Namibia, 2016-2017 (2023)
- Eurosurveillance
Ilmavirta Heikki, Ollgren Jukka, Räisänen Kati, Kinnunen Tuure, Hakanen Antti J, Jalava Jari, Lyytikäinen Outi
(A1 Refereed original research article in a scientific journal)
(2022)
Haindongo Erastus H, Funtua Binta, Singu Boni, Hedimbi Marius, Kalemeera Francis, Hamman Jana, Vainio Olli, Hakanen Antti J, Vuopio Jaana
(A1 Refereed original research article in a scientific journal)
2022
- PLoS ONE
Vanhatalo Sanja, Munukka Eveliina, Kallonen Teemu, Sippola Suvi, Grönroos Juha, Haijanen Jussi, Hakanen Antti J, Salminen Paulina
(A1 Refereed original research article in a scientific journal)
(2022)
Sula Sami, Han Tatu T, Marttila Harri, Haijanen Jussi, Löyttyniemi Eliisa, Sippola Suvi, Grönroos Juha, Hakanen Antti J, Salminen Paulina
(A1 Refereed original research article in a scientific journal)
(2022)
- Journal of Clinical Microbiology
Wegner Fanny, Roloff Tim, Huber Michael, Cordey Samuel, Ramette Alban, Gerth Yannick, Bertelli Claire, Stange Madlen, Seth-Smith Helena MB, Mari Alfredo, Leuzinger Karoline, Cerutti Lorenzo, Harshman Keith, Xenarios Ioannis, Le Mercier Philippe, Bittel Pascal, Neuenschwander Stefan, Opota Onya, Fuchs Jonas, Panning Marcus, Michel Charlotte, Hallin Marie, Demuyser Thomas, De Mendonca Ricardo, Savelkoul Paul, Dingemans Jozef, van der Veer Brian, Boers Stefan A, Claas Eric CJ, Coolen Jordy PM, Melchers Willem JG, Gunell Marianne, Kallonen Teemu, Vuorinen Tytti, Hakanen Antti J, Bernhoff Eva, Hetland Marit Andrea Klokkhammer, Berman Hadar Golan, Adar Sheera, Moran-Gilad Jacob, Wolf Dana G, Leib Stephen L, Nolte Oliver, Kaiser Laurent, Schmutz Stefan, Kufner Verena, Zaheri Maryam, Trkola Alexandra, Aamot Hege V, Hirsch Hans H, Greub Gilbert, Egli Adrian
(A1 Refereed original research article in a scientific journal)