Juha Mykkänen
Dosentti (Adjunct professor)
juha.mykkanen@utu.fi +358 29 450 4364 +358 50 406 3612 Kiinamyllynkatu 10 Turku : B503 : https://orcid.org/0000-0001-9898-2660 |
cardiovascular and metabolic risk factors; metabolic disease; obesity; insulin resistance and type 2 diabetes; molecular genetics and genomics; metabolomics; transcriptomics; omics data analysis; statistics; type 1 diabetes; lysinuric protein intolerance; research project planning
EDUCATION AND DEGREES
2015 Adjunct professor (docent) of Molecular genetics, University of Turku (UTU)
2003 PhD, Medical genetics, UTU
1998 MSc, Genetics, UTU
CURRENT POSITION
Senior scientist, Research Centre of Applied and Preventive Cardiovascular Medicine, Medical Faculty, UTU
PAST POSITIONS
2009 – 2015 Senior scientist, Finnish Type 1 Diabetes Prediction and Prevention (DIPP) study, Department of Paediatrics and Adolescent Medicine, Turku University Hospital (TUH)
2005 – 2008 Academy of Finland Post-doctoral Researcher, Turku Centre for Biotechnology, UTU
2003 – 2008 Post-doctoral researcher, Turku Centre for Biotechnology, UTU
1998 – 2003 Post-graduate (PhD) training, Department of Medical Genetics, UTU
2000 – 2002 Part-time teacher, Department of Biology, UTU
1998 – 1999 Assistant (8 months), Department of Medical Genetics, UTU
1995 – 1997 Part-time research assistant, Department of Medical Genetics, UTU
I have dedicated my whole career on human health related research. This started already during my pre-graduate stage when I was working in Adjunct professor Jaana Lähdetie's research group at the Department of Medical Genetics (UTU) studying sperm aneuploidy of testicular cancer patients treated with radiotherapy. After my M.Sc., I familiarized with molecular genetics of hereditary diseases in children. In my doctoral dissertation I studied the molecular genetics of hereditary lysinuric protein intolerance (LPI) disease under the guidance Prof. emeritus of Pertti Aula at the Medical Genetics department. During this time I familiarized with various methods of human genomics and the so-called Finnish disease heritage.
During my post-doc studies, I moved to the Turku Centre for Biotechnology (UTU) to study the development of Type 1 diabetes as part of the Finnish DIPP study. During this time, I studied of Type 1 diabetes, molecular immunology and various genomic biomedical research methods such genome-wide microarrays. During the post-doc period I was a post-doctoral researcher of the Academy of Finland, the subject of the Molecular Markers of Type 1 diabetes, where biospecimens collected from DIPP children were analysed using various microarray platforms (in-house cDNA, Affymetrix and Illumina) in order to find genes or gene networks that change early in the course of Type 1 diabetes development.
The third phase of my research career began in 2009 as a senior researcher at the DIPP Research Clinic (Department of Paediatrics and Adolescent Medicine, TUH) led by Prof. emeritus Olli Simell. My research interest was to dissect and identify factors that modulate the risk for Type 1 diabetes related autoimmunity.
The fourth phase of my research career started in March 2015 as a senior researcher in The Cardiovascular Risk in Young Finns Study (YFS) coordinated by Academy Professor Olli Raitakari at the Research Centre of Applied and Preventive Cardiovascular Medicine (UTU), where risk factors for cardiovascular and metabolic diseases are studied in great detail. The main aim of my current research is to dissect the complex interplay of human genome, transcriptome and metabolome with risk factors of cardiovascular and metabolic diseases, both in cross-sectional and longitudinal settings, to increase our understanding of pathophysiology of cardiovascular and metabolic diseases.
Currently I supervise advanced studies or thesis in (bio)medicine.
- A method for reporting and classifying acute infectious diseases in a prospective study of young children: TEDDY (2015)
- BMC Pediatrics
- Clinical features of celiac disease: a prospective birth cohort. (2015)
- Pediatrics
- Dysfunction in macrophage toll-like receptor signaling caused by an inborn error of cationic amino acid transport (2015)
- Molecular Immunology
- Early Childhood Gut Microbiomes Show Strong Geographic Differences Among Subjects at High Risk for Type 1 Diabetes (2015)
- Diabetes Care
- Predictors of Progression From the Appearance of Islet Autoantibodies to Early Childhood Diabetes: The Environmental Determinants of Diabetes in the Young (TEDDY) (2015)
- Diabetes Care
- Role of Type 1 diabetes associated SNPs on risk of autoantibody positivity in the TEDDY Study (2015)
- Diabetes
- Serum Proteomes Distinguish Children Developing Type 1 Diabetes in a Cohort With HLA-Conferred Susceptibility (2015)
- Diabetes
- The 6 year incidence of diabetes-associated autoantibodies in genetically at-risk children: the TEDDY study (2015)
- Diabetologia
- An Increase in Serum 25-Hydroxyvitamin D Concentrations Preceded a Plateau in Type 1 Diabetes Incidence in Finnish Children. (2014)
- Journal of Clinical Endocrinology and Metabolism
- Bacteroides dorei dominates gut microbiome prior to autoimmunity in Finnish children at high risk for type 1 diabetes (2014)
- Frontiers in Microbiology
- Biomarker discovery study design for type 1 diabetes in The Environmental Determinants of Diabetes in the Young (TEDDY) study. (2014)
- Diabetes/Metabolism Research and Reviews
- Children followed in the TEDDY study are diagnosed with type 1 diabetes at an early stage of disease. (2014)
- Pediatric Diabetes
- Factors Associated With Maternal-Reported Actions to Prevent Type 1 Diabetes in the First Year of the TEDDY Study (2014)
- Diabetes Care
- Innate immune activity is detected prior to seroconversion in children with HLA-conferred type 1 diabetes susceptibility. (2014)
- Diabetes
- Prevalence of obesity was related to HLA-DQ in 2-4-year-old children at genetic risk for type 1 diabetes (2014)
- International Journal of Obesity
- Risk of pediatric celiac disease according to HLA haplotype and country. (2014)
- New England Journal of Medicine
- Cord Serum Lipidome in Prediction of Islet Autoimmunity and Type 1 Diabetes (2013)
- Diabetes
- Genome-wide comparison of two RNA-stabilizing reagents for transcriptional profiling of peripheral blood (2013)
- Translational Research
- Insulin resistance, beta cell function and the effect of non-HLA genetic variants in Finnish DIPP study children with HLA-conferred risk for type 1 diabetes (2013)
- Diabetologia
- Interactions of y+LAT1 and 4F2hc in the y+L amino acid transporter complex – consequences of lysinuric protein intolerance-causing mutations (2013)
- General Physiology and Biophysics