Elnaz Fazeli
 MSc


elnfaz@utu.fi




ORCID identifier: https://orcid.org/0000-0002-0770-0777

Researchgate

Areas of expertise
Microscopy; Fluorescence; Image analysis

Biography

PhD student working on osteoclast cytoskeleton characterization. Focusing on microscopy techniques and image analysis.

Teacher tutor, and teaching master's degree students in Biomedical Sciences, Biomedical Imaging track.




Research

Using imaging tools to study osteoclast cytoskeleton during fusion and transcytosis events.

Developing biophysical tools to enable high- and super-resolution imaging of resorbing osteoclasts.



Teaching

I have been teaching Fluorescence in Bioanalytical Research, Bioimage Informatics, Hand-on Advanced Microscopy courses.



Publications
  • Characterization of Immune Cell Populations of Cutaneous Neurofibromas in Neurofibromatosis 1  (2024)  
    • Laboratory Investigation
     Kallionpää Roope A., Peltonen Sirkku, Le Kim My, Martikkala Eija, Jääskeläinen Mira, Fazeli Elnaz, Riihilä Pilvi, Haapaniemi Pekka, Rokka Anne, Salmi Marko, Leivo Ilmo, Peltonen Juha
    (    A1 Refereed original research article in a scientific journal)


  • Mini Fluorescence Microscope: Prototype Results and Further Development  (2023)  
    • Proceedings of the International Astronautical Congress
    IAC 2023 Congress Proceedings, 74th International Astronautical Congress (IAC), Baku, Azerbaijan Tiensuu Kiira, Lehti Jussi, Saari Jouni, Virtanen Pasi, Säntti Tero, Hirvonen Mika, Nerurkar Aditi, Sarwar Uruj, Tcarenkova Elena, Fazeli Elnaz, Hänninen Pekka, van Loon Jack, Gaubert François
    (    A4 Refereed article in a conference publication )


  • Mast Cells in Human Cutaneous Neurofibromas: Density, Subtypes, and Association with Clinical Features in Neurofibromatosis 1  (2022)  
    • Dermatology
     Kallionpää Roope A, Ahramo Kaisa, Martikkala Eija, Fazeli Elnaz, Haapaniemi Pekka, Rokka Anne, Leivo Ilmo, Harvima Ilkka T, Peltonen Juha, Peltonen Sirkku

    (    A1 Refereed original research article in a scientific journal)


  • Miniaturized Fluorescence Microscope for biological research in space  (2021)  
    • Proceedings of the International Astronautical Congress
    IAF Microgravity Sciences and Processes Symposium 2021: Held at the 72nd International Astronautical Congress (IAC 2021), Dubai, United Arab Emirates 25 – 29 October 2021 Tiensuu Kiira, Lehti Jussi, Saari Jouni, Säntti Tero, Virtanen Pasi, Hirvonen Mika, Pitkänen Lauri, Tcarenkova Elena, Fazeli Elnaz, Hänninen Pekka, van Loon Jack J.W.A., Gaubert François
    (    A4 Refereed article in a conference publication )


  • QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy  (2021)   Glyn Nelson, Ulrike Boehm, Steve Bagley, Peter Bajcsy, Johanna Bischof, Claire M Brown, Aurelien Dauphin, Ian M Dobbie, John E Eriksson, Orestis Faklaris, Julia Fernandez-Rodriguez, Alexia Ferrand, Laurent Gelman, Ali Gheisari, Hella Hartmann, Christian Kukat, Alex Laude, Miso Mitkovski, Sebastian Munck, Alison J North, Tobias M Rasse, Ute Resch-Genger, Lucas C Schuetz, Arne Seitz, Caterina Strambio-De-Castillia, Jason R Swedlow, Ioannis Alexopoulos, Karin Aumayr, Sergiy Avilov, Gert-Jan Bakker, Rodrigo R Bammann, Andrea Bassi, Hannes Beckert, Sebastian Beer, Yury Belyaev, Jakob Bierwagen, Konstantin A Birngruber, Manel Bosch, Juergen Breitlow, Lisa A Cameron, Joe Chalfoun, James J Chambers, Chieh-Li Chen, Eduardo Conde-Sousa, Alexander D Corbett, Fabrice P Cordelieres, Elaine Del Nery, Ralf Dietzel, Frank Eismann, Elnaz Fazeli, Andreas Felscher, Hans Fried, Nathalie Gaudreault, Wah Ing Goh, Thomas Guilbert, Roland Hadleigh, Peter Hemmerich, Gerhard A Holst, Michelle S Itano, Claudia B Jaffe, Helena K Jambor, Stuart C Jarvis, Antje Keppler, David Kirchenbuechler, Marcel Kirchner, Norio Kobayashi, Gabriel Krens, Susanne Kunis, Judith Lacoste, Marco Marcello, Gabriel G Martins, Daniel J Metcalf, Claire A Mitchell, Joshua Moore, Tobias Mueller, Michael S Nelson, Stephen Ogg, Shuichi Onami, Alexandra L Palmer, Perrine Paul-Gilloteaux, Jaime A Pimentel, Laure Plantard, Santosh Podder, Elton Rexhepaj, Michael Royeck, Arnaud Royon, Markku A Saari, Damien Schapman, Vincent Schoonderwoert, Britta Schroth-Diez, Stanley Schwartz, Michael Shaw, Martin Spitaler, Martin T Stoeckl, Damir Sudar, Jeremie Teillon, Stefan Terjung, Roland Thuenauer, Christian D Wilms, Graham D Wright, Roland Nitschke
    (    Other publication)


  • QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy  (2021)  
    • Journal of Microscopy
     Nelson Glyn, Boehm Ulrike, Bagley Steve, Bajcsy Peter, Bischof Johanna, Brown Claire M., Dauphin Aurélien, Dobbie Ian M., Eriksson John E., Faklaris Orestis, Fernandez-Rodriguez Julia, Ferrand Alexia, Gelman Laurent, Gheisari Ali, Hartmann Hella, Kukat Christian, Laude Alex, Mitkovski Miso, Munck Sebastian, North Alison J., Rasse Tobias M., Resch-Genger Ute, Schuetz Lucas C., Seitz Arne, Strambio-De-Castillia Caterina, Swedlow Jason R., Alexopoulos Ioannis, Aumayr Karin, Avilov Sergiy, Bakker Gert-Jan, Bammann Rodrigo R., Bassi Andrea, Beckert Hannes, Beer Sebastian, Belyaev Yury, Bierwagen Jakob, Birngruber Konstantin A., Bosch Manel, Breitlow Juergen, Cameron Lisa A., Chalfoun Joe, Chambers James J., Chen Chieh-Li, Conde-Sousa Eduardo, Corbett Alexander D., Cordelieres Fabrice P., Del Nery Elaine, Dietzel Ralf, Eismann Frank, Fazeli Elnaz, Felscher Andreas, Fried Hans, Gaudreault Nathalie, Goh Wah Ing, Guilbert Thomas, Hadleigh Roland, Hemmerich Peter, Holst Gerhard A., Itano Michelle S., Jaffe Claudia B., Jambor Helena K., Jarvis Stuart C., Keppler Antje, Kirchenbuechler David, Kirchner Marcel, Kobayashi Norio, Krens Gabriel, Kunis Susanne, Lacoste Judith, Marcello Marco, Martins Gabriel G., Metcalf Daniel J., Mitchell Claire A., Moore Joshua, Mueller Tobias, Nelson Michael S., Ogg Stephen, Onami Shuichi, Palmer Alexandra L., Paul-Gilloteaux Perrine, Pimentel Jaime A., Plantard Laure, Podder Santosh, Rexhepaj Elton, Royon Arnaud, Saari Markku A., Schapman Damien, Schoonderwoert Vincent, Schroth-Diez Britta, Schwartz Stanley, Shaw Michael, Spitaler Martin, Stoeckl Martin T., Sudar Damir, Teillon Jeremie, Terjung Stefan, Thuenauer Roland, Wilms Christian D., Wright Graham D., Nitschke Roland
    (    A1 Refereed original research article in a scientific journal)


  • Automated cell tracking using StarDist and TrackMate  (2020)  
    • F1000Research
     Fazeli E, Roy NH, Follain G, Laine RF, von Chamier L, Hänninen PE, Eriksson JE, Tinevez J, Jacquemet G
    (    A1 Refereed original research article in a scientific journal)


  • Density and function of actin-microdomains in healthy and NF1 deficient osteoclasts revealed by the combined use of atomic force and stimulated emission depletion microscopy  (2020)  
    • Journal of Physics D: Applied Physics
     Takahiro Deguchi, Elnaz Fazeli, Sami Koho, Paula Pennanen, Maria Alanne, Mayank Modi, John E Eriksson, Kari V Vienola, Pekka E Hänninen, Juha Peltonen, Tuomas Näreoja
    (    A1 Refereed original research article in a scientific journal)


  • Diversity of actin architecture in human osteoclasts: Network of curved and branched actin supporting cell shape and intercellular micrometer level tubes  (2017)  
    • Molecular and Cellular Biochemistry
     Pennanen P, Alanne M, Fazeli E, Deguchi T, Näreoja T, Peltonen S, Peltonen J.
    (    A1 Refereed original research article in a scientific journal)


  • Ratiometric Sensing and Imaging of Intracellular pH Using Polyethylenimine-Coated Photon Upconversion Nanoprobes  (2017)  
    • Analytical Chemistry
     Nareoja T, Deguchi T, Christ S, Peltomaa R, Prabhakar N, Fazeli E, Perala N, Rosenholm JM, Arppe R, Soukka T, Schaferling M
    (    A1 Refereed original research article in a scientific journal)


  • Advanced Cellulose Fibers for Efficient Immobilization of Enzymes  (2016)  
    • Biomacromolecules
     Iris Beatriz Vega Erramuspe, Elnaz Fazeli, Tuomas Näreoja, Jani Trygg, Pekka Hänninen, Thomas Heinze, Pedro Fardim
    (    A1 Refereed original research article in a scientific journal)


  • Image Quality Ranking Method for Microscopy  (2016)  
    • Scientific Reports
     Koho S, Fazeli E, Eriksson JE, Hanninen PE
    (    A1 Refereed original research article in a scientific journal)


  • In vitro model of bone to facilitate measurement of adhesion forces and super-resolution imaging of osteoclasts  (2016)  
    • Scientific Reports
     Deguchi T, Alanne MH, Fazeli E, Fagerlund KM, Pennanen P, Lehenkari P, Hanninen PE, Peltonen J, Nareoja T
    (    A1 Refereed original research article in a scientific journal)


  • Sphingolipids inhibit vimentin-dependent cell migration  (2015)  
    • Journal of Cell Science
     Hyder CL, Kemppainen K, Isoniemi KO, Imanishi SY, Goto H, Inagaki M, Fazeli E, Eriksson JE, Tornquist K
    (    A1 Refereed original research article in a scientific journal)



Last updated on 2023-12-07 at 11:53