Ion Petre
Department of Mathematics and Statistics ion.petre@utu.fi : 367 |
Discrete mathematics; theoretical computer science; complex systems; data science; computational systems biology; machine learning
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- Self-assembly models of variable resolution (2012)
- Transactions on computational systems biology
- Simple gene assembly as a rewriting of directed overlap-inclusion graphs (2012)
- Theoretical Computer Science
- The phosphorylation of the heat shock factor as a modulator for the heat shock response (2012)
- IEEE/ACM Transactions on Computational Biology and Bioinformatics
- Unconventional computing (2012)
- Natural Computing
- A simple mass-action model for the eukaryotic heat shock response and its mathematical validation (2011)
- Natural Computing
- Complexity-preserving simulations among three variants of accepting networks of evolutionary processors (2011)
- Natural Computing
- Computational Models for Cell Processes (2011)
- Transactions on computational systems biology
- Directed overlap-inclusion graphs as representations of ciliate genes (2011)
- Fundamenta Informaticae
- Methods for biochemical model decomposition and quantitative submodel comparison (2011)
- Israel Journal of Chemistry
- Proceedings of the 10th International Conference on Unconventional Computation (2011) Calude Cristian, Kari Jarkko, Petre Ion, Rozenberg Grzegorz
- Proceedings of the Third International Workshop on Computational Models for Cell Processes (2011) Petre Ion, de Vink Erik
- The phosphorylation of the heat shock factor as a modulator for the heat shock response (2011) Proceedings of the 9th International Conference on Computational Methods in Systems Biology Czeizler Eugen, Rogojin Vladimir, Petre Ion
- Accepting splicing systems (2010)
- Theoretical Computer Science
- A sequence-based analysis of the pointer distribution of stichotrichous ciliates (2010)
- BioSystems
- Computing the graph-based parallel complexity of gene assembly (2010)
- Theoretical Computer Science
- Extended strings and graphs for simple gene assembly (2010)
- Theoretical Computer Science
- Three models for gene assembly in ciliates: a comparison (2010)
- Computer Science Journal of Moldova
- Algebraic systems and pushdown automata (2009) Handbook of Weighted Automata Petre Ion, Salomaa Arto
- A new mathematical model for the heat shock response (2009) Algorithmic bioprocesses Petre Ion, Mizera Andrzej, Hyder Claire, Mikhailov Andrey, Eriksson John, Sistonen Lea, Back Ralph-Johan
- Computational heuristics to simplify a biological model (2009)
- Lecture Notes in Computer Science
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