Sini Junttila
simaju@utu.fi +358 29 450 3756 Tykistökatu 6 Turku |
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- CellRomeR: an R package for clustering cell migration phenotypes from microscopy data (2025)
- Bioinformatics Advances
- A proximal enhancer regulates RORA expression during early human Th17 cell differentiation (2024)
- Clinical Immunology
- ECCB2024: The 23rd European Conference on Computational Biology (2024)
- Bioinformatics
- Inferring Tree-Shaped Single-Cell Trajectories with Totem (2024)
- Methods in Molecular Biology
- Long noncoding RNA LIRIL2R modulates FOXP3 levels and suppressive function of human CD4+ regulatory T cells by regulating IL2RA (2024)
- Proceedings of the National Academy of Sciences of the United States of America
- Cell-connectivity-guided trajectory inference from single-cell data (2023)
- Bioinformatics
- Elevated 18:0 lysophosphatidylcholine contributes to the development of pain in tissue injury (2023)
- PAIN
- PIM kinases regulate early human Th17 cell differentiation (2023)
- Cell Reports
- Serum Insights: Leveraging the Power of miRNA Profiling as an Early Diagnostic Tool for Non-Small Cell Lung Cancer (2023)
- Cancers
- A systematic comparison of FOSL1, FOSL2 and BATF-mediated transcriptional regulation during early human Th17 differentiation (2022)
- Nucleic Acids Research
- Benchmarking methods for detecting differential states between conditions from multi-subject single-cell RNA-seq data (2022)
- Briefings in Bioinformatics
- COVID-19-specific transcriptomic signature detectable in blood across multiple cohorts (2022)
- Frontiers in Genetics
- Early DNA methylation changes in children developing beta cell autoimmunity at a young age (2022)
- Diabetologia
- Long Intergenic Noncoding RNA MIAT as a Regulator of Human Th17 Cell Differentiation (2022)
- Frontiers in Immunology
- scShaper: an ensemble method for fast and accurate linear trajectory inference from single-cell RNA-seq data (2022)
- Bioinformatics
- Spectrum and Density of Gamma and X-ray Induced Mutations in a Non-Model Rice Cultivar (2022)
- Plants
- Differential ATAC-seq and ChIP-seq peak detection using ROTS (2021)
- NAR Genomics and Bioinformatics: Nucleic Acids Research Genomics and Bioinformatics
- ILoReg: a tool for high-resolution cell population identification from single-cell RNA-seq data (2021)
- Bioinformatics
- Leptin and fractalkine: novel subcutaneous cytokines in burn injury (2020)
- Disease Models and Mechanisms
- Reproducibility-optimized detection of differential DNA methylation (2020)
- Epigenomics
UTU Research Portal