Sampo Pyysalo
sampo.pyysalo@utu.fi ORCID-tunniste: https://orcid.org/0000-0002-6279-5000 |
natural language processing; machine learning; scientific text mining
I am a researcher in the TurkuNLP group (https://turkunlp.org/) and Research Fellow at the Department of Computing, University of Turku. My work focuses on machine learning for natural language processing, with particular application domains including scientific text mining, Finnish language technology, and large language models.
After defending my PhD thesis in computer science at the University of Turku, I held researcher positions at the University of Tokyo, University of Manchester and University of Cambridge before returning to the University of Turku in 2019.
The primary focus of my research is on natural language processing using machine learning approaches, with recent emphasis on deep learning methods and large language models. I have been working on scientific text mining as an application area for nearly 20 years, with specific focus on the English biomedical literature, and have in recent years also addressed a variety of tasks in the processing of Finnish text as well as multi- and cross-lingual applications. My work covers the full range of natural language processing development from initial task design to the development of practical applications and organizing community challenges, including also running manual annotation efforts and developing annotation tools and machine learning methods for various natural language processing tasks.
My current teaching focuses on the natural language processing study module shared between the departments of Languages and Computing, with courses ranging from introductory to a course on deep learning for natural language processing.
- Towards better structured and less noisy Web data: Oscar with Register annotations (2022)
- International Conference on Computational Linguistics
(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa) - Beyond the English web: Zero-shot cross-lingual and lightweight monolingual classification of registers (2021) Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics: Student Research Workshop Repo Liina, Skantsi Valtteri, Rönnqvist Samuel, Hellström Saara, Oinonen Miika, Salmela Anna, Biber Douglas, Egbert Jesse, Pyysalo Sampo, Laippala Veronika
(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa) - Correction to 'The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets' (vol 49, pg D605, 2021) (2021)
- Nucleic Acids Research
(O2 Muu julkaisu ) - Deep learning for sentence clustering in essay grading support (2021) Proceedings of the 14th International Conference on Educational Data Mining (EDM 2021) Chang Li-Hsin, Rastas Iiro, Pyysalo Sampo, Ginter Filip
(D3 Artikkeli ammatillisessa konferenssijulkaisussa ) - Fine-grained Named Entity Annotation for Finnish (2021)
- Linköping Electronic Conference Proceedings
(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa) - Overview of DrugProt BioCreative VII track: quality evaluation and large scale text mining of drug-gene/protein relations (2021) Proceedings of the BioCreative VII Challenge Evaluation Workshop Miranda Antonio, Mehryary Farrokh, Luoma Jouni, Pyysalo Sampo, Valencia Alfonso, Krallinger Martin
(B3 Vertaisarvioimaton artikkeli konferenssijulkaisussa) - Quantitative Evaluation of Alternative Translations in a Corpus of Highly Dissimilar Finnish Paraphrases (2021) Proceedings for the First Workshop on Modelling Translation: Translatology in the Digital Age Chang Li-Hsin, Pyysalo Sampo, Kanerva Jenna, Ginter Filip
(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa) - The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets (2021)
- Nucleic Acids Research
(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä ) - WikiBERT Models: Deep Transfer Learning for Many Languages (2021)
- Linköping Electronic Conference Proceedings
(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa) - A broad-coverage corpus for finnish named entity recognition (2020) 12th International Conference on Language Resources and Evaluation Jouni Luoma, Miika Oinonen, Maria Pyykönen, Veronika Laippala, Sampo Pyysalo
(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa)



