Tomi Suomi - UTU Research Portal - UTU Research Portal

Tomi Suomi

- Docent, Postdoctoral Researcher,
Faculty of Medicine (University of Turku)
Turku Bioscience Centre (Independent units)

Medical Bioinformatics Centre

tomi.suomi@utu.fi

+358 29 450 3803

Tykistökatu 6

Turku

ORCID identifier: https://orcid.org/0000-0003-3639-979X

Medical Bioinformatics Centre

Turku Bioscience

Publications

2 of 5

Metaproteomics Beyond Databases: Addressing the Challenges and Potentials of De Novo Sequencing (2025)
- Proteomics
van den Bossche, Tim; Beslic, Denis; van Puyenbroeck, Sam; Suomi, Tomi; Holstein, Tanja; Martens, Lennart; Elo, Laura L.; Muth, Thilo
(A2 Refereed review article in a scientific journal )
Proteomic profiling reveals alterations in metabolic and cellular pathways in severe obesity and following metabolic bariatric surgery (2025)
- American Journal of Physiology : Endocrinology and Metabolism
Dadson, Prince; Honka, Miikka-Juhani; Suomi, Tomi; Haridas, P. A. Nidhina; Rokka, Anne; Palani, Senthil; Goltseva, Elena; Wang, Ning; Roivainen, Anne; Salminen, Paulina; James, Peter; Olkkonen, Vesa M.; Elo, Laura L.; Nuutila, Pirjo
(A1 Refereed original research article in a scientific journal)
Single-cell RNA-seq analysis of longitudinal CD4+ T cell samples reveals cell-type-specific changes during early stages of type 1 diabetes (2025)
- Genome Medicine
Biradar, Rahul; Kalim, Ubaid Ullah; Lönnberg, Tapio; Junttila, Sini; Suomi, Tomi; Norman, Sebastián Zúñiga; Starskaia, Inna; Paulin, Niklas; Mikkola, Lea; Vaarala, Outi; Rasool, Omid; Knip, Mikael; Elo, Laura L.; Lahesmaa, Riitta
(A1 Refereed original research article in a scientific journal)
Targeted serum proteomics of longitudinal samples from newly diagnosed youth with type 1 diabetes affirms markers of disease (2025)
- Diabetologia
Moulder, Robert; Hirvonen, M. Karoliina; Valikangas, Tommi; Suomi, Tomi; Overbergh, Lut; Peakman, Mark; Brunak, Soren; Mathieu, Chantal; Knip, Mikael; Elo, Laura L.; Lahesmaa, Riitta
(A1 Refereed original research article in a scientific journal)
Disruption of HSD17B12 in mouse hepatocytes leads to reduced body weight and defect in the lipid droplet expansion associated with microvesicular steatosis (2024)
- FASEB Journal
Heikelä, Hanna; Mairinoja, Laura; Ruohonen, Suvi T.; Rytkönen, Kalle T.; de Brot, Simone; Laiho, Asta; Koskinen, Satu; Suomi, Tomi; Elo, Laura L.; Strauss, Leena; Poutanen, Matti
(A1 Refereed original research article in a scientific journal)
Distinct cellular immune responses in children en route to type 1 diabetes with different first-appearing autoantibodies (2024)
- Nature Communications
Starskaia, Inna; Valta, Milla; Pietilä, Sami; Suomi, Tomi; Pahkuri, Sirpa; Kalim, Ubaid Ullah; Rasool, Omid; Rydgren, Emilie; Hyöty, Heikki; Knip, Mikael; Veijola, Riitta; Ilonen, Jorma; Toppari, Jorma; Lempainen, Johanna; Elo, Laura L.; Lahesmaa, Riitta
(A1 Refereed original research article in a scientific journal)
ECCB2024: The 23rd European Conference on Computational BiologyMulti-omics analysis reveals drivers of loss of β-cell function after newly diagnosed autoimmune type 1 diabetes : An INNODIA multicenter study (2024)
- BioinformaticsDiabetes/Metabolism Research and Reviews
Kukkonen-Macchi, A; Hautaniemi, S; Heil, KF; Heinäniemi, M; Jensen, LJ; Junttila, S; Käll, L; Laiho, A; Maccallum, P; Nykter, M; Persson, B; Suomi, T; Van Den Bossche, T; Nyrönen, TH; Elo, LL
(B1 Non-refereed article in a scientific journal)
(2024)
Armenteros, Jose Juan Almagro; Brorsson, Caroline; Johansen, Christian Holm; Banasik, Karina; Mazzoni, Gianluca; Moulder, Robert; Hirvonen, Karoliina; Suomi, Tomi; Rasool, Omid; Bruggraber, Sylvaine F. A.; Marcovecchio, M. Loredana; Hendricks, Emile; Al-Sari, Naba; Mattila, Ismo; Legido-Quigley, Cristina; Suvitaival, Tommi; Chmura, Piotr J.; Knip, Mikael; Schulte, Anke M.; Lee, Jeong Heon; Sebastiani, Guido; Grieco, Giuseppina Emanuela; Elo, Laura L.; Kaur, Simranjeet; Pociot, Flemming; Dotta, Francesco; Tree, Tim; Lahesmaa, Riitta; Overbergh, Lut; Mathieu, Chantal; Peakman, Mark; Brunak, Søren; INNODIA investigators
(A1 Refereed original research article in a scientific journal)
Phenotypic profiling of human induced regulatory T cells at early differentiation : insights into distinct immunosuppressive potential (2024)
- Cellular and Molecular Life Sciences
Kattelus, Roosa; Starskaia, Inna; Lindén, Markus; Batkulwar, Kedar; Pietilä, Sami; Moulder, Robert; Marson, Alexander; Rasool, Omid; Suomi, Tomi; Elo, Laura L.; Lahesmaa, Riitta; Buchacher, Tanja
(A1 Refereed original research article in a scientific journal)
Serum proteomics of mother-infant dyads carrying HLA-conferred type 1 diabetes risk (2024)
- iScience
Bhosale, Santosh D.; Moulder, Robert; Suomi, Tomi; Ruohtula, Terhi; Honkanen, Jarno; Virtanen, Suvi M.; Ilonen, Jorma; Elo, Laura L.; Knip, Mikael; Lahesmaa, Riitta
(A1 Refereed original research article in a scientific journal)