A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä
Revealing secrets of the enigmatic omega subunit of bacterial RNA polymerase
Tekijät: Juha Kurkela, Julia Fredman, Tiina A Salminen, Taina Tyystjärvi
Kustantaja: John Wiley & Sons Ltd
Julkaisuvuosi: 2020
Journal: Molecular Microbiology
Lehden akronyymi: Mol. Microbiol.
Vuosikerta: 115
Numero: 1
Sivujen määrä: 11
ISSN: 0950-382X
eISSN: 1365-2958
DOI: https://doi.org/10.1111/mmi.14603
The conserved omega (ω) subunit of RNA polymerase (RNAP) is the only nonessential subunit of bacterial RNAP core. The small ω subunit (7 kDa–11.5 kDa) contains three conserved α helices, and helices α2 and α3 contain five fully conserved amino acids of ω. Four conserved amino acids stabilize the correct folding of the ω subunit and one is located in the vicinity of the β′ subunit of RNAP. Otherwise ω shows high vari- ation between bacterial taxa, and although the main interaction partner of ω is always β′, many interactions are taxon-specific. ω-less strains show pleiotropic phenotypes, and based on in vivo and in vitro results, a few roles for the ω subunits have been described. Interactions of the ω subunit with the β′ subunit are important for the RNAP core assembly and integrity. In addition, the ω subunit plays a role in promoter selection, as ω-less RNAP cores recruit fewer primary σ factors and more alternative σ factors than intact RNAP cores in many species. Furthermore, the promoter selec- tion of an ω-less RNAP holoenzyme bearing the primary σ factor seems to differ from that of an intact RNAP holoenzyme.