A1 Refereed original research article in a scientific journal
Overview of the Cancer Genetics and Pathway Curation tasks of BioNLP Shared Task 2013
Authors: Pyysalo S, Ohta T, Rak R, Rowley A, Chun HW, Jung SJ, Choi SP, Tsujii J, Ananiadou S
Publisher: BIOMED CENTRAL LTD
Publication year: 2015
Journal: BMC Bioinformatics
Journal name in source: BMC BIOINFORMATICS
Journal acronym: BMC BIOINFORMATICS
Article number: ARTN S2
Volume: 16
Number of pages: 19
ISSN: 1471-2105
DOI: https://doi.org/10.1186/1471-2105-16-S10-S2
Conclusions: The results indicate that existing event extraction technology can generalize to meet the novel challenges represented by the CG and PC task settings, suggesting that extraction methods are capable of supporting the construction of knowledge bases on the molecular mechanisms of cancer and the curation of biomolecular pathway models. The CG and PC tasks continue as open challenges for all interested parties, with data, tools and resources available from the shared task homepage.