Vertaisarvioitu artikkeli konferenssijulkaisussa (A4)

TurkuNLP Entry for Interactive Bio-ID Assignment




Julkaisun tekijätSuwisa Kaewphan, Farrokh Mehryary, Kai Hakala, Tapio Salakoski, Filip Ginter

ToimittajaCecilia Arighi, Qinghua Wang, Cathy Wu

Konferenssin vakiintunut nimiBioCreative

Julkaisuvuosi2018

Kirjan nimi *Proceedings of the BioCreative VI Workshop

Aloitussivu32

Lopetussivun numero35

ISBN978-84-948397-0-2

Verkko-osoitehttp://www.biocreative.org/resources/publications/bcvi-proceedings/

Rinnakkaistallenteen osoitehttps://research.utu.fi/converis/portal/detail/Publication/28249832


Tiivistelmä

We participate in BioCreative VI: Interactive Bio-ID Assignment (Bio-ID) track by developing systems capable of named entity recognition and normalization of 6 entity types, namely Protein, Cell, Organism, Tissue, Molecule and Cellular. Our named entity recognition system is based on conditional random fields. For named entity normalization, we apply fuzzy matching and rule-based system to disambiguate and assign unique identifiers to the entities. The official evaluation shows that average F1-scores of all entity types for our recognition and normalization systems on strict span offsets are 0.720 and 0.668, respectively.


Ladattava julkaisu

This is an electronic reprint of the original article.
This reprint may differ from the original in pagination and typographic detail. Please cite the original version.




Last updated on 2022-07-04 at 16:39