A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä
BioImageXD: an open, general-purpose and high-throughput image-processing platform
Tekijät: Kankaanpaa P, Paavolainen L, Tiitta S, Karjalainen M, Paivarinne J, Nieminen J, Marjomaki V, Heino J, White DJ
Kustantaja: NATURE PUBLISHING GROUP
Julkaisuvuosi: 2012
Journal: Nature Methods
Tietokannassa oleva lehden nimi: NATURE METHODS
Lehden akronyymi: NAT METHODS
Numero sarjassa: 7
Vuosikerta: 9
Numero: 7
Aloitussivu: 683
Lopetussivu: 689
Sivujen määrä: 7
ISSN: 1548-7091
DOI: https://doi.org/10.1038/NMETH.2047
Tiivistelmä
BioImageXD puts open-source computer science tools for three-dimensional visualization and analysis into the hands of all researchers, through a user-friendly graphical interface tuned to the needs of biologists. BioImageXD has no restrictive licenses or undisclosed algorithms and enables publication of precise, reproducible and modifiable workflows. It allows simple construction of processing pipelines and should enable biologists to perform challenging analyses of complex processes. We demonstrate its performance in a study of integrin clustering in response to selected inhibitors.
BioImageXD puts open-source computer science tools for three-dimensional visualization and analysis into the hands of all researchers, through a user-friendly graphical interface tuned to the needs of biologists. BioImageXD has no restrictive licenses or undisclosed algorithms and enables publication of precise, reproducible and modifiable workflows. It allows simple construction of processing pipelines and should enable biologists to perform challenging analyses of complex processes. We demonstrate its performance in a study of integrin clustering in response to selected inhibitors.
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