B3 Non-refereed article in a conference publication

The 2 '-OH group as a hydrogen bond donor in the reactions of group I introns




AuthorsLonnberg T, Kiiski J, Korhonen J, Mikkola S

Conference nameXIII Symposium on Chemistry of Nucleic Acid Components

Publication year2005

Journal:Collection Symposium Series

Journal name in sourceChemistry of Nucleic Acid Components

Journal acronymCOLL SYMPOS SERIES

Volume7

First page 269

Last page270

Number of pages2

ISBN80-86241-25-4


Abstract

Hydrolytic reactions of two trinucleoside 3',3',5'-monophosphates (1a and 1b) have been followed by RP HPLC over a wide pH range to elucidate the role of the 2'-OH group of the departing 3'-linked nucleoside as an intramolecular hydrogen bond donor accelerating the cleavage. In aqueous alkali la is cleaved 27 times as rapidly as 1b. The product distribution, however, remains unchanged upon methylation of the 2'-oxygen: P-O3' bond cleavage accounts for 88% of the total reaction with both model phosphotriesters. The results suggest that the phosphorane intermediate, rather than the departing 3'-oxyanion, is stabilized by intramolecular hydrogen bonding.




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