BODIL: a molecular modeling environment for structure-function analysis and drug design



: Lehtonen JV, Still DJ, Rantanen VV, Ekholm J, Bjorkland D, Iftikhar Z, Huhtala M, Repo S, Jussila A, Jaakkola J, Pentikainen O, Nyronen T, Salminen T, Gyllenberg M, Johnson MS

Publisher: KLUWER ACADEMIC PUBL

: 2004

: Journal of Computer-Aided Molecular Design

: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

: J COMPUT AID MOL DES

: 18

: 6

: 401

: 419

: 19

: 0920-654X

DOI: https://doi.org/10.1007/s10822-004-3752-4


BODIL is a molecular modeling environment geared to help the user to quickly identify key features of proteins critical to molecular recognition, especially (1) in drug discovery applications, and (2) to understand the structural basis for function. The program incorporates state-of-the-art graphics, sequence and structural alignment methods, among other capabilities needed in modern structure-function-drug target research. BODIL has a flexible design that allows on-the-fly incorporation of new modules, has intelligent memory management, and fast multi-view graphics. A beta version of BODIL and an accompanying tutorial are available at http://www.abo.fi/fak/mnf/bkf/research/johnson/bodil.html.



Last updated on 2024-26-11 at 16:45