A1 Refereed original research article in a scientific journal
BODIL: a molecular modeling environment for structure-function analysis and drug design
Authors: Lehtonen JV, Still DJ, Rantanen VV, Ekholm J, Bjorkland D, Iftikhar Z, Huhtala M, Repo S, Jussila A, Jaakkola J, Pentikainen O, Nyronen T, Salminen T, Gyllenberg M, Johnson MS
Publisher: KLUWER ACADEMIC PUBL
Publication year: 2004
Journal: Journal of Computer-Aided Molecular Design
Journal name in source: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
Journal acronym: J COMPUT AID MOL DES
Volume: 18
Issue: 6
First page : 401
Last page: 419
Number of pages: 19
ISSN: 0920-654X
DOI: https://doi.org/10.1007/s10822-004-3752-4
Abstract
BODIL is a molecular modeling environment geared to help the user to quickly identify key features of proteins critical to molecular recognition, especially (1) in drug discovery applications, and (2) to understand the structural basis for function. The program incorporates state-of-the-art graphics, sequence and structural alignment methods, among other capabilities needed in modern structure-function-drug target research. BODIL has a flexible design that allows on-the-fly incorporation of new modules, has intelligent memory management, and fast multi-view graphics. A beta version of BODIL and an accompanying tutorial are available at http://www.abo.fi/fak/mnf/bkf/research/johnson/bodil.html.
BODIL is a molecular modeling environment geared to help the user to quickly identify key features of proteins critical to molecular recognition, especially (1) in drug discovery applications, and (2) to understand the structural basis for function. The program incorporates state-of-the-art graphics, sequence and structural alignment methods, among other capabilities needed in modern structure-function-drug target research. BODIL has a flexible design that allows on-the-fly incorporation of new modules, has intelligent memory management, and fast multi-view graphics. A beta version of BODIL and an accompanying tutorial are available at http://www.abo.fi/fak/mnf/bkf/research/johnson/bodil.html.
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