A3 Refereed book chapter or chapter in a compilation book

Quantification of Ikaros Splice Variants by Real-Time PCR




AuthorsElli Veistinen, Kalle-Pekka Nera, Jukka Alinikula, Olli Lassila

EditorsCarl Wittwer, Meinhard Hahn, Karen Kaul

Publication year2004

Book title Rapid Cycle Real-Time PCR — Methods and Applications

First page 73

Last page82

Number of pages10

DOIhttps://doi.org/10.1007/978-3-642-18840-4_8


Abstract

The Ikaros family is an important group of transcription factors essential in the normal development of hematopoietic lineages [1, 2, 3]. They function as transcriptional regulators through chromatin remodeling [4] and are active only as dimers [1]. Ikaros family members — Ikaros, Aiolos, and Helios — are DNA-binding, zinc-finger proteins. They all generate a large pattern of splice variants [1,5, 6,7,8]. Cloned Ikaros isoforms are shown in Figure 1. Some of the splice variants lack one or more of the four N-terminal zinc fingers and their DNA binding affinity is altered or totally lost. Isoforms that lack the DNA-binding capacity are thought to have a dominant negative function because they prevent the binding of the dimer to DNA. Ikaros family proteins function as part of a multicomponent chromatin remodeling complex [9]. Splice variants missing one or more exons might selectively lack sites for protein-protein interactions or regulation of the complex, and therefore, have altered function.



Last updated on 2024-26-11 at 22:53