Tarja Lamminen - UTU Research Portal

Tarja Lamminen

Surgery (Department of Clinical Medicine)

tarlammi@utu.fi

Kiinamyllynkatu 10

Turku

Publications

1 of 2

Nalidixic acid-a good marker of fluoroquinolone resistance mechanisms in Escherichia coliLongitudinal single-cell RNA-seq analysis reveals stress-promoted chemoresistance in metastatic ovarian cancer (2025)
- Microbiology spectrumPLoS Medicine
Kalinen, Sofia; Kallio, Heini; Kallonen, Teemu; Knaapila, Juha; Lamminen, Tarja; Huovinen, Pentti; Boström, Peter; Hakanen, Antti J.; Gunell, Marianne
(A1 Refereed original research article in a scientific journal)
1H-NMR-based urine metabolomics of prostate cancer and benign prostatic hyperplasia (2024)
- HeliyonScience Advances
Zniber, Mohammed; Lamminen, Tarja; Taimen, Pekka; Boström, Peter J.; Huynh, Tan-Phat
(A1 Refereed original research article in a scientific journal)
Differences in Gut Microbiota Profiles and Microbiota Steroid Hormone Biosynthesis in Men with and Without Prostate Cancer (2024)
- European Urology Open Science
Kalinen, Sofia; Kallonen, Teemu; Gunell, Marianne; Ettala, Otto; Jambor, Ivan; Knaapila, Juha; Syvänen, Kari T.; Taimen, Pekka; Poutanen, Matti; Aronen, Hannu J.; Ollila, Helena; Pietilä, Sami; Elo, Laura L.; Lamminen, Tarja; Hakanen, Antti J.; Munukka, Eveliina; Boström, Peter J.; the Multi-IMPROD Study Group
(A1 Refereed original research article in a scientific journal)
Profiling steroid hormone landscape of bladder cancer reveals depletion of intratumoural androgens to castration levels: a cross-sectional studyCo-evolution of matrisome and adaptive adhesion dynamics drives ovarian cancer chemoresistance (2024)
- EBioMedicineCancer Epidemiology, Biomarkers and PreventionNature Communications
Kettunen, Kimmo; Mathlin, Julia; Lamminen, Tarja; Laiho, Asta; Häkkinen, R. Merja; Auriola, Seppo; Elo, L. Laura; Boström, J. Peter; Poutanen, Matti; Taimen, Pekka
(A1 Refereed original research article in a scientific journal)
A platform for efficient establishment and drug-response profiling of high-grade serous ovarian cancer organoidsHow to read biparametric MRI in men with a clinical suspicious of prostate cancer: Pictorial review for beginners with public access to imaging, clinical and histopathological database (2023)
- Developmental CellActa Radiologica Open
Senkowski Wojciech., Gall-Mas Laura, Falco Matias Marin, Li Yilin, Lavikka Kari, Kriegbaum Mette C., Oikkonen Jaana, Bulanova Daria, Pietras Elin J., Voßgröne Karolin, Chen Yan Jun., Erkan Erdogan Pekcan, Dai Jun, Lundgren Anastasia, Grønning Høg Mia Kristine, Larsen Ida Marie, Lamminen Tarja, Kaipio Katja, Huvila Jutta, Virtanen Anni, Engelholm Lars, Christiansen Pernille, Santoni-Rugiu Eric, Huhtinen Kaisa, Carpén Olli, Hynninen Johanna, Hautaniemi Sampsa, Vähärautio Anna, Wennerberg Krister
(A1 Refereed original research article in a scientific journal)
Detection of Prostate Cancer Using Biparametric Prostate MRI, Radiomics, and Kallikreins: A Retrospective Multicenter Study of Men With a Clinical Suspicion of Prostate Cancer (2022)
- Journal of Magnetic Resonance Imaging
Perez Ileana Montoya, Merisaari Harri, Jambor Ivan, Ettala Otto, Taimen Pekka, Knaapila Juha, Kekki Henna, Khan Ferdhos L, Syrjälä Elise, Steiner Aida, Syvänen Kari T, Verho Janne, Seppänen Marjo, Rannikko Antti, Riikonen Jarno, Mirtti Tuomas, Lamminen Tarja, Saunavaara Jani, Falagario Ugo, Martini Alberto, Pahikkala Tapio, Pettersson Kim, Boström Peter J, Aronen Hannu J
(A1 Refereed original research article in a scientific journal)
Integrins are enriched on aberrantly fucosylated tumour‐derived urinary extracellular vesicles (2022)
- Journal of Extracellular Biology
Islam Md. Khirul, Dhondt Bert, Syed Parvez, Khan Misba, Gidwani Kamlesh, Webber Jason, Hendrix An, Jenster Guido, Lamminen Tarja, Boström Peter J, Pettersson Kim, Lamminmäki Urpo, Leivo Janne
(A1 Refereed original research article in a scientific journal)
(2022)
Zhang Kaiyang, Erkan Erdogan Pekcan, Jamalzadeh Sanaz, Dai Jun, Andersson Noora, Kaipio Katja, Lamminen Tarja, Mansuri Naziha, Huhtinen Kaisa, Carpén Olli, Hietanen Sakari, Oikkonen Jaana, Hynninen Johanna, Virtanen Anni, Häkkinen Antti, Hautaniemi Sampsa, Vähärautio AnnaA1 Refereed original research article in a scientific journal
The Movember Global Action Plan 1 (GAP1): Unique Prostate Cancer Tissue Microarray Resource (2022)
Ouellet Veronique, Erickson Andrew on behalf of GAP1 UTMAs Contributing Investigators, Wiley Kathy, Morrissey Colm, Berge Viktor, Moreno Carlos S., Tasken Kristin Austlid, Trudel Dominique, True Lawrence D., Lewis Michael S., Svindland Aud, Ertunc Onur, Vidal Igor Damasceno, Osunkoya Adeboye O., Jones Tracy, Bova G. Steven, Lamminen Tarja, Achtman Ariel H., Buzza Mark, Kouspou Michelle M., Bigler Steven A., Zhou Xinchun, Freedland Stephen J., Mes-Masson Anne-Marie, Garraway Isla P., Trock Bruce J., Taimen Pekka, Saad Fred, Mirtti Tuomas, Knudsen Beatrice S., De Marzo Angelo M.
(A1 Refereed original research article in a scientific journal)
Analysis of single-cell RNA-seq data from ovarian cancer samples before and after chemotherapy links stress-related transcriptional profile with chemotherapy resistance (2021)
Pietilä Elina A., Gonzalez-Molina Jordi, Moyano-Galceran Lidia, Jamalzadeh Sanaz, Zhang Kaiyang, Lehtinen Laura, Turunen S. Pauliina, Martins Tomás A., Gultekin Okan, Lamminen Tarja, Kaipio Katja, Joneborg Ulrika, Hynninen Johanna, Hietanen Sakari, Grénman Seija, Lehtonen Rainer, Hautaniemi Sampsa, Carpén Olli, Carlson Joseph W., Lehti Kaisa
(A1 Refereed original research article in a scientific journal)
(2021)
Jambor Ivan, Martini Albero, Falagario Ugo G, Ettala Otto, Taimen Pekka, Knaapila Juha, Syvänen Kari T, Steiner Aida, Verho Janne, Perez Ileana M, Merisaari Harri, Vainio Paula, Lamminen Tarja, Saunavaara Jani, Carrieri Giuseppe, Boström Peter J, Aronen Hannu J
(A2 Refereed review article in a scientific journal )
Negative Predictive Value of Biparametric Prostate Magnetic Resonance Imaging in Excluding Significant Prostate Cancer: A Pooled Data Analysis Based on Clinical Data from Four Prospective, Registered Studies2021
- European Urology Focus
Juha Knaapila, Ivan Jambor, Otto Ettala, Pekka Taimen, Janne Verho, Ileana Montoya Perez, Aida Kiviniemi, Tapio Pahikkala, Harri Merisaari, Tarja Lamminen, Jani Saunavaara, Hannu J.Aronen, Kari T.Syvänen, Peter J.Boström
(A1 Refereed original research article in a scientific journal)
PRISM: Recovering cell type specific expression profiles from individual composite RNA-seq samples (2021)
- BioinformaticsbioRxiv
Häkkinen Antti, Zhang Kaiyang, Alkodsi Amjad, Andersson Noora, Pekcan Erkan Erdogan, Dai Jun, Kaipio Katja, Lamminen Tarja, Mansuri Naziha, Huhtinen Kaisa, Vähärautio Anna, Carpén Olli, Hynninen Johanna, Hietanen Sakari, Lehtonen Rainer, Hautaniemi SampsaA1 Refereed original research article in a scientific journal
2020
Zhang K, Erkan EP, Dai J, Andersson N, Kaipio K, Lamminen T, Mansuri N, Huhtinen K, Carpen O, Hynninen J, others
(Other publication)
Singling out tumor heterogeneity and chemoresistance in high-grade serous ovarian cancerQualitative and Quantitative Reporting of a Unique Biparametric MRI: Towards Biparametric MRI-Based Nomograms for Prediction of Prostate Biopsy Outcome in Men With a Clinical Suspicion of Prostate Cancer (IMPROD and MULTI-IMPROD Trials) (2020)
- Clinical Cancer ResearchJournal of Magnetic Resonance Imaging
Erkan EP, Dai J, Zhang KY, Kaipio K, Lamminen T, Mansuri N, Suominen L, Alkodsi A, Huhtinen K, Hietanen S, Hynninen J, Grenman S, Carpen O, Hautaniemi S, Vaharautio A
(Other publication)
Personalized Drug Sensitivity Screening for Bladder Cancer Using Conditionally Reprogrammed Patient-derived Cells (2019)
- European Urology
Kimmo Kettunen, Peter J. Boström, Tarja Lamminen, Taija Heinosalo, Gun West , Irena Saarinen, Katja Kaipio, Juha Rantala, Chris Albanese, Matti Poutanen, Pekka Taimen
(A1 Refereed original research article in a scientific journal)
Prebiopsy IMPROD Biparametric Magnetic Resonance Imaging Combined with Prostate-Specific Antigen Density in the Diagnosis of Prostate Cancer: An External Validation Study (2019)
- European Urology Oncology
Knaapila J, Jambor I, Perez IM, Ettala O, Taimen P, Verho J, Kiviniemi A, Pahikkala T, Merisaari H, Lamminen T, Saunavaara J, Aronen HJ, Syvänen KT, Boström PJ
(A1 Refereed original research article in a scientific journal)
Prevalence of Complications Leading to a Health Care Contact After Transrectal Prostate Biopsies: A Prospective, Controlled, Multicenter Study Based on a Selected Study Cohort (2019)
- European Urology Focus
Knaapila J, Gunell M, Syvänen K, Ettala O, Kähkönen E, Lamminen T, Seppänen M, Jambor I, Rannikko A, Riikonen J, Munukka E, Eerola E, Hakanen AJ, Boström PJ
(A1 Refereed original research article in a scientific journal)
(2019)
Perez IM, Jambor I, Kauko T, Verho J, Ettala O, Falagario U, Merisaari H, Kiviniemi A, Taimen P, Syvänen KT, Knaapila J, Seppänen M, Rannikko A, Riikonen J, Kallajoki M, Mirtti T, Lamminen T, Saunavaara J, Pahikkala T, Boström PJ, Aronen HJ
(A1 Refereed original research article in a scientific journal)
Validation of IMPROD biparametric MRI in men with clinically suspected prostate cancer: A prospective multi-institutional trial (2019)
Ivan Jambor, Janne Verho, Otto Ettala, Juha Knaapila, Pekka Taimen, Kari T. Syvänen, Aida Kiviniemi, Esa Kähkönen, Ileana Montoya Perez, Marjo Seppänen, Antti Rannikko, Outi Oksanen, Jarno Riikonen, Sanna Mari Vimpeli, Tommi Kauko, Harri Merisaari, Markku Kallajoki, Tuomas Mirtti, Tarja Lamminen, Jani Saunavaara, Hannu J. Aronen, Peter J. Boström
(A1 Refereed original research article in a scientific journal)