Juho Heimonen
PhD
juaheim@utu.fi Vesilinnantie 5 Turku Office: 450L No office hours. Please contact me via email to make an appointment. IKITIK, Information and language technology for health information and communication |
text mining; machine learning; knowledge representation; bioNLP; bioinformatics
Research on applications of text mining, machine learning and knowledge representation in various domains (such as biomedicine and healthcare). A member of the IKITIK consortium.
Juho Heimonen received his PhD degree in Bioinformatics from the University of Turku in 2019 and is currently working as a university teacher at the Department of Computing. His main research interest is the use of text mining and machine learning to solve domain-specific problems. Heimonen has studied university pedagogy and has acquired over 10 years of teaching experience. He has also worked in several research projects in connection to the themes of his PhD dissertation (Knowledge Representation and Text Mining in Biomedical, Healthcare, and Political Domains).
Heimonen's current research interests include the use of text mining, machine learning and knowledge representation in various domains. He is particularly interested in how text mining and knowledge representations can be used to improve healthcare services and how machine learning methods can be adapted to domain-specific problems.
Heimonen is a member of the IKITIK research consortium.
Heimonen is interested in teaching data analytics, programming and bioinformatics to both major and minor subject students. He is excited about MOOCs and other possibilities to organise teaching online in a time and location independent manner.
Heimonen is currently responsible for Bioinformatics Programming Course (5 ECTS) and Introduction to Statistical Analysis (5 ECTS) at the Department of Computing. He also lectures in Applications of Data Analysis (5 ECTS) and Digitalisaatio sosiaali- ja terveydenhuollon palveluissa (3 ECTS), supervises bachelor's thesis students and organises thesis seminars. His previous teaching responsibilities include Supplementary mathematics (5 ECTS), Introduction to Statistics (4 ECTS), Bioinformatiikan perusteet (5 ECTS), and Mathematics for Bioinformatics (4 ECTS). He has also been a guest lecturer in courses at other departments.
- Documentation of the Clinical Phase of the Cardiac Rehabilitation Process in a Finnish University Hospital District (2014)
- Communications in Computer and Information Science
(A4 Refereed article in a conference publication ) - On evaluation of automatically generated clinical discharge summaries (2014)
- CEUR Workshop Proceedings
(A4 Refereed article in a conference publication ) - Properties of Object-Level Cross-Validation Schemes for Symmetric Pair-Input Data (2014) Structural, Syntactic, and Statistical Pattern Recognition Heimonen J, Salakoski T, Pahikkala T
(A4 Refereed article in a conference publication ) - Sydänleikattujen potilaiden kivun kirjaaminen (2014) Perhe, yhteiskunta ja hoitotiede Heikkilä K, Heimonen J, Salakoski T, Salanterä S
(A4 Refereed article in a conference publication ) - Using cluster analysis to identify weak signals of lethal trends in aviation and healthcare documentation. (2013)
- International Journal of Networking and Virtual Organisations
(A1 Refereed original research article in a scientific journal) - An Ontology to Improve Accessibility and Quality of Patient Instructions (2012) Proceedings of CLEF 2012 Evaluation Labs and Workshop Juho Heimonen, Tapio Salakoski, Sanna Salanterä
(A4 Refereed article in a conference publication ) - Avoiding Hazards - What Can Health Care Learn from Aviation? (2012)
- Communications in Computer and Information Science
(A4 Refereed article in a conference publication ) - EXTRACTING CONTEXTUALIZED COMPLEX BIOLOGICAL EVENTS WITH RICH GRAPH-BASED FEATURE SETS (2011)
- Computational Intelligence
(A1 Refereed original research article in a scientific journal) - Reconstruction of Semantic Relationships from Their Projections in Biomolecular Domain (2010) Proceedings of the 2010 Workshop on Biomedical Natural Language Processing Heimonen J, Björne J, Salakoski T
(A4 Refereed article in a conference publication ) - Extracting Complex Biological Events with Rich Graph-Based Feature Sets (2009) Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task Björne J, Heimonen J, Ginter F, Airola A, Pahikkala T, Salakoski T
(A4 Refereed article in a conference publication )



