Pedro Puigbo - UTU Research Portal

Pedro Puigbo

- Docent,
Department of Biology (Faculty of Science)

pepuav@utu.fi

Personal Web site(external)

Google Scholar(external)

Areas of expertise

Evolutionary Genomics, Microbial Genomics, Evolution, Phylogenomics, Computational Biology, Bioinformatics

Publications

1 of 2

Use of Live Biopreservatives and Bacteriophages to Enhance the Safety of Meat Products (2025)
- Life
Rodriguez-Marca, Cristina; Domenech-Coca, Cristina; Nakamura, Miho; Ortega-Olive, Nadia; Puigbo, Pere
(A2 Refereed review article in a scientific journal )
Glyphosate residues in soil and phosphate fertilizer affect foliar endophytic microbial community composition and phytohormone levels in potato (2024)
- Phytobiomes journal
Mathew, Suni Anie; Jeevannavar, Aditya; Helander, Marjo; Tamminen, Manu; Puigbò, Pere; Rainio, Miia; Saikkonen, Kari; Fuchs, Benjamin
(A1 Refereed original research article in a scientific journal)
Pollution-related changes in nest microbiota: Implications for growth and
fledging in three passerine birds (2024)
- Environmental Pollution
Leino, Lyydia; Vesterinen, Eero; Sánchez-Virosta, Pablo; Puigbò, Pere; Eeva, Tapio; Rainio, Miia
(A1 Refereed original research article in a scientific journal)
Toward an integrated understanding of how extreme polar light regimes, hybridization, and light-sensitive microbes shape global biodiversity (2024)
- One Earth
Saikkonen, Kari; Birge, Traci; Fuchs, Benjamin; Helander, Marjo; Ihalainen, Janne A.; Nissinen, Riitta; Puigbò, Pere
(A1 Refereed original research article in a scientific journal)
Use of the Phylobone database for the annotation of bone extracellular matrix proteins in reindeer (Rangifer tarandus) (2024)
- Science Progress
Sánchez-Reverté Alba, Fontcuberta-Rigo Margalida, Nakamura Miho, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
Ecosystem consequences of herbicides: the role of microbiome (2023)
- Trends in Ecology and Evolution
Ruuskanen Suvi, Fuchs Benjamin, Nissinen Riitta, Puigbò Pedro, Rainio Miia, Saikkonen Kari, Helander Marjo
(A2 Refereed review article in a scientific journal )
Glyphosate-based herbicide use affects individual microbial taxa in strawberry endosphere but not the microbial community composition (2023)
- Journal of Applied Microbiology
Mathew Suni, Fuchs Benjamin, Nissinen Riita, Helander Marjo, Puigbò Pere, Saikkonen Kari, Muola Anne
(A1 Refereed original research article in a scientific journal)
Phylobone: a comprehensive database of bone extracellular matrix proteins in human and model organisms (2023)
- Bone Research
Fontcuberta-Rigo Margalida, Nakamura Miho, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
The Mutational Landscape of SARS-CoV-2 (2023)
- International Journal of Molecular Sciences
Saldivar-Espinoza Bryan, Garcia-Segura Pol, Novau-Ferré Nil, Macip Guillem, Martínez Ruben, Puigbò Pere, Cereto-Massagué Adrià, Pujadas Gerard, Garcia-Vallve Santiago
(A1 Refereed original research article in a scientific journal)
Does Glyphosate Affect the Human Microbiota? (2022)
- Life
Puigbò Pere, Leino Lyydia I, Rainio Miia J, Saikkonen Kari, Saloniemi Irma, Helander Marjo
(A1 Refereed original research article in a scientific journal)
Prediction of Recurrent Mutations in SARS-CoV-2 Using Artificial Neural Networks (2022)
- International Journal of Molecular Sciences
Saldivar-Espinoza Bryan, Macip Guillem, Garcia-Segura Pol, Mestres-Truyol Júlia, Puigbò Pere, Cereto-Massague Adrià, Pujadas Gerard, Garcia-Vallve Santiago
(A1 Refereed original research article in a scientific journal)
Quantification of the Potential Impact of Glyphosate-Based Products on Microbiomes (2022)
- Journal of Visualized Experiments
Mathew Suni Anie, Muola Anne, Saikkonen Kari, Saloniemi Irma, Helander Marjo, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
Rethinking the Intrinsic Sensitivity of Fungi to Glyphosate (2022)
- Biotech
Tall Tuomas, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
Why Is the UAG (Amber) Stop Codon Almost Absent in Highly Expressed Bacterial Genes? (2022)
- Life
Belin Dominique, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
Adaptation of bacteria to glyphosate: a microevolutionary perspective of the enzyme 5-enolpyruvylshikimate-3-phosphate synthase (2021)
- Environmental Microbiology Reports
Rainio Miia J, Ruuskanen Suvi, Helander Marjo, Saikkonen Kari, Saloniemi Irma, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
Alterations in Metabolome and Microbiome Associated with an Early Stress Stage in Male Wistar Rats: A Multi-Omics Approach (2021)
- International Journal of Molecular Sciences
Hernandez-Baixauli Julia, Puigbò Pere, Abasolo Nerea, Palacios-Jordan Hector, Foguet-Romero Elisabet, Suñol David, Galofré Mar, Caimari Antoni, Baselga-Escudero Laura, Bas Josep MD, Mulero Miquel
(A1 Refereed original research article in a scientific journal)
An Unsupervised Algorithm for Host Identification in Flaviviruses (2021)
- Life
Truong Phuoc Nguyen, Garcia-Vallvé Santiago, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
A Pilot Study for Metabolic Profiling of Obesity-Associated Microbial Gut Dysbiosis in Male Wistar Rats (2021)
- Biomolecules
Hernandez-Baixauli Julia, Puigbo Pere, Torrell Helena, Palacios-Jordan Hector, Ripoll Vicent J. Ribas, Caimari Antoni, Del Bas Josep M., Baselga-Escudero Laura, Mulero Miquel
(A1 Refereed original research article in a scientific journal)
Classification of the glyphosate target enzyme (5-enolpyruvylshikimate-3-phosphate synthase) for assessing sensitivity of organisms to the herbicide (2021)
- Journal of Hazardous Materials
Leino Lyydia, Tall Tuomas, Helander Marjo, Saloniemi Irma, Saikkonen Kari, Ruuskanen Suvi, Puigbò Pere
(A1 Refereed original research article in a scientific journal)
Genome-Wide Comparative Analysis of Phylogenetic Trees: The Prokaryotic Forest of Life (2019) Evolutionary Genomics: Statistical and Computational Methods Puigbò Pere, Wolf Yuri I., Koonin Eugene V.
(A3 Refereed book chapter or chapter in a compilation book)