Tapio Salakoski


Professor, Language and Speech Technology (Department of Future Technologies)
Faculty of Science and Engineering
tapio.salakoski@utu.fi
+358 29 450 2708
+358 40 032 6978

Vesilinnantie 5
Turku
Agora





Areas of expertise
Artificial Intelligence, especially Language technology and Machine Learning
Bio and Health Informatics
Learning Analytics and Technology
Digital Humanities


Publications
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Pain process of patients with cardiac surgery — Semantic annotation of electronic patient record data (2019)
Journal of Clinical Nursing
Heikkilä Kristiina, Axelin Anna, Peltonen Laura-Maria, Heimonen Juho, Anttila Pauliina, Viljanen Timo, Salakoski Tapio, Salanterä Sanna
(
A1 Journal article – refereed)

Biomedical Event Extraction Using Convolutional Neural Networks and Dependency Parsing (2018) Proceedings of the BioNLP 2018 workshop Björne J, Salakoski T
(
A4 Article in conference proceedings)

Combining support vector machines and LSTM networks for chemical-protein relation extraction (2018) Proceedings of the BioCreative VI Workshop Farrokh​ Mehryary,​​ Jari​ Björne​,​ Tapio​ Salakoski​,​ Filip​ Ginter​
(
A4 Article in conference proceedings)

Evaluation of a Prototype System that Automatically Assigns Subject Headings to Nursing Narratives Using Recurrent Neural Network (2018) Proceedings of the 9th International Workshop on Health Text Mining and Information Analysis (LOUHI 2018) Hans Moen, Kai Hakala, Laura-Maria Peltonen, Henry Suhonen, Petri Loukasmäki, Tapio Salakoski, Filip Ginter, Sanna Salanterä
(
A4 Article in conference proceedings)

Ihmislähtöisyyden integrointi tietotekniikan diplomi-insinöörikoulutukseen (2018) Valmiina työelämään! Visioita ja näkökulmia työhyvinvoinnista ja työelämävalmiuksista sekä menetelmiä niiden kehittämiseen Johanna Isoaho, Jouni Isoaho, Seppo Virtanen, Tapio Salakoski
(
D2 Article in a professional research book)

Improving layman readability of clinical narratives with unsupervised synonym replacement (2018) Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth Moen H., Peltonen L., Koivumäki M., Suhonen H., Salakoski T., Ginter F., Salanterä S.
(
A3 Book chapter)

Ontology Development for Patient Education Documents Using a Professional- and Patient-Oriented Delphi Method (2018)
Computers, Informatics, Nursing
Juho Heimonen, Riitta Danielsson-Ojala, Tapio Salakoski, Heljä Lundgren-Laine, Sanna Salanterä
(
A1 Journal article – refereed)

Potent pairing: ensemble of long short-term memory networks and support vector machine for chemical-protein relation extraction (2018)
Database: The Journal of Biological Databases and Curation
Farrokh Mehryary, Jari Björne, Tapio Salakoski, Filip Ginter
(
A1 Journal article – refereed)

Secondary use of electronic health records: Availability aspects in two Nordic countries (2018)
Health Information Management Journal
Vikström A., Moen H., Moosavi SR, Salakoski T., Salanterä S.
(
A1 Journal article – refereed)

Turku Neural Parser Pipeline: An End-to-End System for the CoNLL 2018 Shared Task (2018) Proceedings of the CoNLL 2018 Shared Task: Multilingual Parsing from Raw Text to Universal Dependencies Jenna Kanerva, Filip Ginter, Niko Miekka, Akseli Leino, Tapio Salakoski
(
A4 Article in conference proceedings)

TurkuNLP Entry for Interactive Bio-ID Assignment (2018) Proceedings of the BioCreative VI Workshop Suwisa Kaewphan, Farrokh Mehryary, Kai Hakala, Tapio Salakoski, Filip Ginter
(
A4 Article in conference proceedings)

Wide-scope biomedical named entity recognition and normalization with CRFs, fuzzy matching and character level modeling (2018)
Database: The Journal of Biological Databases and Curation
Suwisa Kaewphan, Kai Hakala, Niko Miekka, Tapio Salakoski, Filip Ginter
(
A1 Journal article – refereed)

Applying BLAST to Text Reuse Detection in Finnish Newspapers and Journals, 1771–1910 (2017) Proceedings of the NoDaLiDa 2017 Workshop on Processing Historical Language Aleksi Vesanto, Asko Nivala, Heli Rantala, Tapio Salakoski, Hannu Salmi, Filip Ginter
(
A4 Article in conference proceedings)

Assessment of metal ion concentration in water with structured feature selection (2017)
Chemosphere
Naula P, Airola A, Pihlasalo S, Perez IM, Salakoski T, Pahikkala T
(
A1 Journal article – refereed)

A System for Identifying and Exploring Text Repetition in Large Historical Document Corpora (2017) Proceedings of the 21st Nordic Conference on Computational Linguistics, NoDaLiDa, 22-24 May 2017, Gothenburg, Sweden Aleksi Vesanto, Asko Nivala, Tapio Salakoski, Hannu Salmi, Filip Ginter
(
A4 Article in conference proceedings)

Automated quantification of Reuters news using a receiver operating characteristic curve analysis: The Western media image of China (2017)
Global Media and China
Aukia Jukka, Heimonen Juho, Pahikkala Tapio, Salakoski Tapio
(
A1 Journal article – refereed)

Creating register sub-corpora for the Finnish Internet Parsebank. (2017)
Linköping Electronic Conference Proceedings
Proceedings of the 21st Nordic Conference on Computational Linguistics Laippala Veronika, Luotolahti Juhani, Kyröläinen Aki-Juhani, Salakoski Tapio, Ginter Filip
(
A4 Article in conference proceedings)

DESCRIPTION OF CARDIAC SURGERY PATIENT’S PAIN PROCESS BASED ON SEMANTIC ANNOTATION OF ELECTRONIC PATIENT RECORD DATA (2017) Kristiina Heikkilä, Anna Axelin, Laura-Maria Peltonen, Pauliina Anttila, Juho Heimonen, Timo Viljanen, Tapio Salakoski, Sanna Salanterä
(
O2 Other)

Detecting mentions of pain and acute confusion in Finnish clinical text (2017) SIGBioMed Workshop on Biomedical Natural Language: Proceedings of the 16th BioNLP Workshop Hans Moen, Kai Hakala, Farrokh Mehryary, Laura-Maria Peltonen, Tapio Salakoski, Filip Ginter, Sanna Salanterä
(
A4 Article in conference proceedings)

Distributional Semantics of the Partitive A Argument Construction in Finnish (2017) Empirical Approaches to Cognitive Linguistics: Analysing Real-Life Data Huumo Tuomas, Kyröläinen Aki-Juhani, Kanerva Jenna, Luotolahti M. Juhani, Salakoski Tapio, Ginter Filip, Laippala Veronika
(
A3 Book chapter)


Last updated on 2019-25-04 at 02:21