Tapio Salakoski

Professor, Bioinformatiikka (Tulevaisuuden teknologioiden laitos)

tapio.salakoski@utu.fi
+358 29 450 2708
+358 40 032 6978

Vesilinnantie 5
Turku





Areas of expertise


Biography


Publications
Go to first page Go to previous page 1 of 5 Go to next page Go to last page

Applying BLAST to Text Reuse Detection in Finnish Newspapers and Journals, 1771–1910 (2017)
Aleksi Vesanto, Asko Nivala, Heli Rantala, Tapio Salakoski, Hannu Salmi, Filip Ginter
(A4 Conference proceedings)

A System for Identifying and Exploring Text Repetition in Large Historical Document Corpora (2017)
Aleksi Vesanto, Asko Nivala, Tapio Salakoski, Hannu Salmi, Filip Ginter
(A4 Conference proceedings)

Distributional Semantics of the Partitive A Argument Construction in Finnish (2017)
Huumo Tuomas, Kyröläinen Aki-Juhani, Kanerva Jenna, Luotolahti M. Juhani, Salakoski Tapio, Ginter Filip, Laippala Veronika
(A3 Book section, Chapters in research books)

An expanded evaluation of protein function prediction methods shows an improvement in accuracy (2016)
Jiang YX, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo DCE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SME, Martelli PL, Profiti G, Casadio R, Cao RZ, Zhong Z, Cheng JL, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Toronen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Dukka BKC, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang HX, Paccanaro A, Gillis J, Sedeno-Cortes AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong QT, Ning W, Zhou YP, Tian WD, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SCE, del Pozo A, Fernandez JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A, Rehman HU, Re M, Mesiti M, Valentini G, Bargsten JW, van Dijk ADJ, Gemovic B, Glisic S, Perovic V, Veljkovic V, Veljkovic N, Almeida-e-Silva DC, Vencio RZN, Sharan M, Vogel J, Kansakar L, Zhang S, Vucetic S, Wang Z, Sternberg MJE, Wass MN, Huntley RP, Martin MJ, O'Donovan C, Robinson PN, Moreau Y, Tramontano A, Babbitt PC, Brenner SE, Linial M, Orengo CA, Rost B, Greene CS, Mooney SD, Friedberg I, Radivojac P
(A1 Journal article (refereed))

Automatically assessed electronic exams in programming courses (2016)
Teemu Rajala, Erkki Kaila, Rolf Lindén, Einari Kurvinen, Erno Lokkila, Mikko-Jussi Laakso, Tapio Salakoski
(A4 Conference proceedings)

Automatic Assessment and Immediate Feedback in Third Grade Mathematics (2016)
Kurvinen Einari, Lokkila Erno, Lindén Rolf, Kaila Erkki, Laakso Mikko-Jussi, Salakoski Tapio
(A4 Conference proceedings)

Comparison of automatic summarisation methods for clinical free text notes (2016)
Artificial Intelligence in Medicine
Hans Moen, Laura-Maria Peltonen, Juho Heimonen, Antti Airola, Tapio Pahikkala, Tapio Salakoski, Sanna Salanterä
(A1 Journal article (refereed))

Deep Learning With Minimal Training Data: TurkuNLP Entry in the BioNLP Shared Task 2016 (2016)
Farrokh Mehryary, Jari Bjorne, Sampo Pyysalo, Tapio Salakoski, Filip Ginter
(A4 Conference proceedings)

Factors Affecting the Availability of Electronic Patient Records for Secondary Purposes – A Case Study (2016)
Antti Vikström, Sanaz Rahimi Moosavi, Hans Moen, Tapio Salakoski, Sanna Salanterä
(A4 Conference proceedings)

How students’ programming process differs from experts – a case study with a robot programming exercise (2016)
E. Lokkila, T. Rajala, A. Veerasamy, P. Enges-Pyykönen, M.J. Laakso, T. Salakoski
(A4 Conference proceedings)

Medical Warning System Based on Internet of Things Using Fog Computing (2016)
Iman Azimi, Arman Anzanpour, Amir M. Rahmani, Pasi Liljeberg, and Tapio Salakoski
(A4 Conference proceedings)

O-CDIO: Emphasizing Design Thinking in CDIO Engineering Cycle (2016)
International Journal of Engineering Education
Ville Taajamaa, Mona Eskandari, Barbara Karanian, Antti Airola, Tapio Pahikkala, Tapio Salakoski
(A1 Journal article (refereed))

Programming Misconceptions in an Introductory Level Programming Course Exam (2016)
Kurvinen Einari, Hellgren Niko, Kaila Erkki, Laakso Mikko-Jussi, Salakoski Tapio
(A4 Conference proceedings)

Redesigning Introductory Computer Science Courses to Use Tutorial-Based Learning (2016)
Lokkila Erno, Kaila Erkki, Karavirta Ville, Salakoski Tapio, Laakso Mikko-Jussi
(A4 Conference proceedings)

Syntactic analyses and named entity recognition for PubMed and. PubMed Central — up-to-the-minute (2016)
Kai Hakala, Suwisa Kaewphan, Tapio Salakoski, Filip Ginter
(A4 Conference proceedings)

Terveydenhuollon lähiesimiehen työn tehostaminen älykkäällä tiedonhallinnalla akuuttihoidossa (2016)
Sanna Salanterä, Stefan Grönroos, Juho Heimonen, Elina Kontio, Heikki Korvenranta, Johan Lilius, Heljä Lundgén-Laine, Laura-Maria Peltonen, Jarno Penttinen, Tapio Salakoski, Eriikka Siirala, Henry Suhonen
(C1 Book)

The Impact of Lecture Attendance on Exams for Novice Programming Students (2016)
Ashok Kumar Veerasamy, Daryl D'Souza, Rolf Lindén, Erkki Kaila, Mikko-Jussi Laakso, Tapio Salakoski
(A1 Journal article (refereed))

UTU at SemEval-2016 Task 10: Binary Classification for Expression Detection (BCED) (2016)
Björne J, Salakoski T
(A4 Conference proceedings)

Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis (2015)
BMC Bioinformatics
Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter
(A1 Journal article (refereed))

A SINO-FINNISH CASE: WHAT WE HAVE LEARNED IN LAUNCHING A DOUBLE MASTER'S DEGREE PROGRAMME (2015)
Guo X, Taajamaa V, Westerlund T, Zheng LR, Tenhunen H, Salakoski T
(A4 Conference proceedings)




Last updated on 2017-13-09 at 14:59