Tapio Pahikkala
Assistant Professor

Associate Professor, Computer Science (Department of Future Technologies)

aatapa@utu.fi
+358 2 333 8565
Vesilinnantie 5
Turku





Publications
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IMPROD biparametric MRI in men with a clinical suspicion of prostate cancer (IMPROD Trial): Sensitivity for prostate cancer detection in correlation with whole-mount prostatectomy sections and implications for focal therapy (2019)
Journal of Magnetic Resonance Imaging
Merisaari H., Jambor I., Ettala O., Boström P.J., Montoya Perez I., Verho J., Kiviniemi A., Syvänen K., Kähkönen E., Eklund L., Pahikkala T., Vainio P., Saunavaara J., Aronen H.J., Taimen P.
(
A1 Journal article – refereed)

Luminometric label array for quantification of metal ions in drinking water – Comparison to human taste panel (2019)
Microchemical Journal
Future Generation Computer Systems
Tanja Seppälä, Tuuli Ruponen, Mari Sandell, Parisa Movahedi, Ileana Montoya Perez, Leo Lepistö, Oskar Laaksonen, Tapio Pahikkala, Harri Härmä, Sari Pihlasalo
(
A1 Journal article – refereed)

Missing data resilient decision-making for healthcare IoT through personalization: A case study on maternal health (2019)
Azimi I., Pahikkala T., Rahmani A., Niela-Vilén H., Axelin A., Liljeberg P.
(
A1 Journal article – refereed)

A comparative study of pairwise learning methods based on Kernel ridge regression (2018)
Neural Computation
Michiel Stock, Tapio Pahikkala, Antti Airola, Bernard De Baets, Willem Waegeman
(
A1 Journal article – refereed)

Algebraic shortcuts for leave-one-out cross-validation in supervised network inference (2018)
Briefings in Bioinformatics
Stock M, Pahikkala T, Airola A, Waegeman W, De Baets B
(
A1 Journal article – refereed)

Combined transcriptomics, proteomics and metabolomics analysis identifies metabolic pathways associated with the loss of cardiac regeneration (2018)
Cardiovascular Research
Talman V, Teppo J, Poho P, Movahedi P, Vaikkinen A, Pahikkala T, Kotiaho T, Kostiainen R, Varjosalo M, Ruskoaho H
(
O2 Other)

Comparison of estimators and feature selection procedures in forest inventory based on airborne laser scanning and digital aerial imagery (2018)
Scandinavian Journal of Forest Research
Pohjankukka J., Tuominen S., Pitkänen J., Pahikkala T., Heikkonen J.
(
A1 Journal article – refereed)

Effect of homogenised and pasteurised versus native cows' milk on gastrointestinal symptoms, intestinal pressure and postprandial lipid metabolism (2018)
International Dairy Journal
Nuora A, Tupasela T, Tahvonen R, Rokka S, Marnila P, Viitanen M, Makela P, Pohjankukka J, Pahikkala T, Yang BR, Kallio H, Linderborg K
(
A1 Journal article – refereed)

Evaluation of machine learning algorithms for improved risk assessment for Down's syndrome (2018)
Computers in Biology and Medicine
Aki Koivu, Teemu Korpimäki, Petri Kivelä, Tapio Pahikkala, Mikko Sairanen
(
A1 Journal article – refereed)

Learning with multiple pairwise kernels for drug bioactivity prediction (2018)
Bioinformatics
Cichonska A, Pahikkala T, Szedmak S, Julkunen H, Airola A, Heinonen M, Aittokallio T, Rousu J
(
A1 Journal article – refereed)

Molecular atlas of postnatal mouse heart development (2018)
Journal of the American Heart Association
Talman V., Teppo J., Pöhö P., Movahedi P., Vaikkinen A., Karhu S. T., Trošt K., Suvitaival T., Heikkonen J., Pahikkala T., Kotiaho T., Kostiainen R., Varjosalo M., Ruskoaho H.
(
A1 Journal article – refereed)

Ship Movement Prediction Using k-NN Method (2018) 2018 Baltic Geodetic Congress (BGC Geomatics) Petra Virjonen, Paavo Nevalainen, Tapio Pahikkala, Jukka Heikkonen
(
A4 Article in conference proceedings)

The spatial leave-pair-out cross-validation method for reliable AUC estimation of spatial classifiers (2018)
Data Mining and Knowledge Discovery
Antti Airola, Jonne Pohjankukka, Johanna Torppa, Maarit Middleton, Vesa Nykänen, Jukka Heikkonen, Tapio Pahikkala
(
A1 Journal article – refereed)

Time-Gated Raman Spectroscopy for Quantitative Determination of Solid-State Forms of Fluorescent Pharmaceuticals (2018)
Analytical Chemistry
Lipiäinen T, Pessi J, Movahedi P, Koivistoinen J, Kurki L, Tenhunen M, Yliruusi J, Juppo AM, Heikkonen J, Pahikkala T, Strachan CJ
(
A1 Journal article – refereed)

Tournament leave-pair-out cross-validation for receiver operating characteristic analysis (2018)
Statistical Methods in Medical Research
Montoya Perez I., Airola A., Boström P., Jambor I., Pahikkala T.
(
A1 Journal article – refereed)

A/B-Test of Retention and Monetization Using the Cox Model (2017) Proceedings, The Thirteenth AAAI Conference on Artificial Intelligence and Interactive Digital Entertainment (AIIDE-17) Markus Viljanen, Antti Airola, Jukka Heikkonen, Tapio Pahikkala
(
A4 Article in conference proceedings)

A community challenge for inferring genetic predictors of gene essentialities through analysis of a functional screen of cancer cell lines (2017)
Cell Systems
Gönen M, Weir Ba, Cowley GS, Vazquez F, Guan Y, Jaiswal A, Karasuyama M, Uzunangelov V, Wang T, Tsherniak A, Howell S, Marbach D, Hoff B, Norman TC, Airola A, Bivol A, Bunte K, Carlin D, Chopra S, Deran A, Ellrott K, Gopalacharyulu P, Graim K, Kaski S, Khan SA, Newton Y, Ng S, Pahikkala T, Paull E, Sokolov A, Tang H, Tang J, Wennerberg K, Xie Y, Zhan X, Zhu F, Aittokallio T, Mamitsuka H, Stuart JM, Boehm JS, Root DE, Xiao G, Stolovitzky G, Hahn WC, Margolin AA
(
A1 Journal article – refereed)

Assessment of metal ion concentration in water with structured feature selection (2017)
Chemosphere
Naula P, Airola A, Pihlasalo S, Perez IM, Salakoski T, Pahikkala T
(
A1 Journal article – refereed)

Automated quantification of Reuters news using a receiver operating characteristic curve analysis: The Western media image of China (2017)
Global Media and China
Aukia Jukka, Heimonen Juho, Pahikkala Tapio, Salakoski Tapio
(
A1 Journal article – refereed)

Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors (2017)
PLoS Computational Biology
Cichonska A, Ravikumar B, Parri E, Timonen S, Pahikkala T, Airola A, Wennerberg K, Rousu J, Aittokallio T
(
A1 Journal article – refereed)


Last updated on 2019-23-05 at 02:21