Riitta Lahesmaa


Academy Professor, Centre for Biotechnology (Turku Centre for Biotechnology)

rilahes@utu.fi
+358 29 450 2415
+358 40 718 4813

Tykistökatu 6
Turku





Publications
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An additive Gaussian process regression model for interpretable non-parametric analysis of longitudinal data (2019)
Nature Communications
Lu Cheng, Siddharth Ramchandran, Tommi Vatanen, Niina Lietzén, Riitta Lahesmaa, Aki Vehtari, Harri Lähdesmäki
(
A1 Journal article – refereed)

Genome-wide CRISPR Screens in T Helper Cells Reveal Pervasive Crosstalk between Activation and Differentiation (2019)
Cell
Henriksson J, Chen X, Gomes T, Ullah U, Meyer KB, Miragaia R, Duddy G, Pramanik J, Yusa K, Lahesmaa R, Teichmann SA
(
A1 Journal article – refereed)

NF-kappa B Signaling and IL-4 Signaling Regulate SATB1 Expression via Alternative Promoter Usage During Th2 Differentiation (2019)
Frontiers in Immunology
Satyajeet P. Khare, Ankitha Shetty, Rahul Biradar, Indumathi Patta, Zhi Jane Chen, Ameya V. Sathe, Puli Chandramouli Reddy, Riitta Lahesmaa, Sanjeev Galande
(
A1 Journal article – refereed)

Quantitative Proteomics Reveals the Dynamic Protein Landscape during Initiation of Human Th17 Cell Polarization (2019) Tripathi SK, Välikangas T, Shetty A, Khan MM, Moulder R, Bhosale SD, Komsi E, Salo V, De Albuquerque RS, Rasool O, Galande S, Elo LL, Lahesmaa R
(
A1 Journal article – refereed)

Atopic asthma after rhinovirus-induced wheezing is associated with DNA methylation change in the SMAD3 gene promoter (2018)
Allergy: European Journal of Allergy and Clinical Immunology: Supplement
R. J. Lund, M. Osmala, M. Malonzo, M. Lukkarinen, A. Leino, J. Salmi, S. Vuorikoski, R. Turunen, T. Vuorinen, C. Akdis, H. Lähdesmäki, R. Lahesmaa, T. Jartti
(
A1 Journal article – refereed)

Characterization and non-parametric modeling of the developing serum proteome during infancy and early childhood (2018)
Scientific Reports
Niina Lietzén, Lu Cheng, Robert Moulder, Heli Siljander, Essi Laajala, Taina Härkönen, Aleksandr Peet, Aki Vehtari, Vallo Tillmann, Mikael Knip, Harri Lähdesmäki, Riitta Lahesmaa
(
A1 Journal article – refereed)

Enterovirus-associated changes in blood transcriptomic profiles of children with genetic susceptibility to type 1 diabetes (2018)
Diabetologia
Niina Lietzen, Le T. T. An, Maria K. Jaakkola, Henna Kallionpää, Sami Oikarinen, Juha Mykkänen, Mikael Knip, Riitta Veijola, Jorma Ilonen, Jorma Toppari, Heikki Hyöty, Riitta Lahesmaa, Laura L. Elo
(
A1 Journal article – refereed)

Immunological biomarkers for the development and progression of type 1 diabetes (2018)
Diabetologia
Chantal Mathieu, Riitta Lahesmaa, Ezio Bonifacio, Peter Achenbach, Timothy Tree
(
A2 Review article in a scientific journal)

Macrophage sensing of single-walled carbon nanotubes via Toll-like receptors (2018) Mukherjee SP, Bondarenko O, Kohonen P, Andon FT, Brzicova T, Gessner I, Mathur S, Bottini M, Calligari P, Stella L, Kisin E, Shvedova A, Autio R, Salminen-Mankonen H, Lahesmaa R, Fadeel B
(
A1 Journal article – refereed)

Serum Proteomic Profiling to Identify Biomarkers of Premature Carotid Atherosclerosis (2018)
Scientific Reports
Santosh D. Bhosale, Robert Moulder, Mikko S. Venäläinen, Juhani S. Koskinen, Niina Pitkänen, Markus T. Juonala, Mika A. P. Kähönen, Terho J. Lehtimäki, Jorma S. A. Viikari, Laura L. Elo, David R. Goodlett, Riitta Lahesmaa, Olli T. Raitakari
(
A1 Journal article – refereed)

snpEnrichR: analyzing co-localization of SNPs and their proxies in genomic regions (2018)
Bioinformatics
Kari Nousiainen, Kartiek Kanduri, Isis Ricaño-Ponce, Cisca Wijmenga, Riitta Lahesmaa, Vinod Kumar, Harri Lähdesmäki
(
A1 Journal article – refereed)

Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3 (2018)
BMC Biology
Angelika Schmidt, Francesco Marabita, Narsis A. Kiani, Catharina C. Gross, Henrik J. Johansson, Szabolcs Éliás, Sini Rautio, Matilda Eriksson, Sunjay Jude Fernandes, Gilad Silberberg, Ubaid Ullah, Urvashi Bhatia, Harri Lähdesmäki, Janne Lehtiö, David Gomez-Cabrero, Heinz Wiendl, Riitta Lahesmaa, Jesper Tegnér
(
A1 Journal article – refereed)

Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells (2018)
Cell Reports
Ubaid Ullah, Syed Bilal Ahmad Andrabi, Subhash Kumar Tripathi, Obaiah Dirasantha, Kartiek Kanduri, Sini Rautio, Catharina C. Gross, Sari Lehtimäki, Kanchan Bala, Johanna Tuomisto, Urvashi Bhatia, Deepankar Chakroborty, Laura L. Elo, Harri Lähdesmäki, Heinz Wiendl, Omid Rasool, Riitta Lahesmaa
(
A1 Journal article – refereed)

AMIGO2 modulates T cell functions and its deficiency in mice ameliorates experimental autoimmune encephalomyelitis (2017)
Brain, Behavior, and Immunity
Zhilin Li, Mohd Moin Khan, Juha Kuja-Panula, Hongyun Wang, Yu Chen, Deyin Guo, Zhi Jane Chen, Riitta Lahesmaa, Heikki Rauvala, Li Tian,
(
A1 Journal article – refereed)

Analysis of the plasma proteome using iTRAQ and TMT-based Isobaric labeling (2017)
Mass Spectrometry Reviews
Robert Moulder, Santosh D. Bhosale, David R. Goodlett, Riitta Lahesmaa
(
A2 Review article in a scientific journal)

DNA methylation and Transcriptome Changes Associated with Cisplatin Resistance in Ovarian Cancer (2017)
Scientific Reports
Riikka J. Lund, Kaisa Huhtinen, Jussi Salmi, Juha Rantala, Elizabeth V. Nguyen, Robert Moulder, David R. Goodlett, Riitta Lahesmaa, Olli Carpén
(
A1 Journal article – refereed)

Genome-wide Analysis of STAT3-Mediated Transcription during Early Human Th17 Cell Differentiation (2017)
Cell Reports
Tripathi Subhash K, Chen Zhi, Larjo Antti, Kanduri Kartiek, Nousiainen Kari, Aijo Tarmo, Ricano-Ponce Isis, Hrdlickova Barbara, Tuomela Soile, Laajala Essi, Salo Verna, Kumar Vinod, Wijmenga Cisca, Lahdesmaki Harri, Lahesmaa Riitta
(
A1 Journal article – refereed)

Hyper-phosphorylation of Sequestosome-1 Distinguishes Resistance to Cisplatin in Patient Derived High Grade Serous Ovarian Cancer Cells (2017)
Molecular and Cellular Proteomics
Nguyen Elizabeth V, Huhtinen Kaisa, Goo Young Ah, Kaipio Katja, Andersson Noora, Rantanen Ville, Hynninen Johanna, Lahesmaa Riitta, Carpen Olli, Goodlett David R
(
A1 Journal article – refereed)

Mass Spectrometry-based Serum Proteomics for Biomarker discovery and validation (2017) Serum/plasma proteomics : Methods and Protocols Santosh D. Bhosale, Robert Moulder, Petri Kouvonen, Riitta Lahesmaa, David R. Goodlett
(
A3 Book chapter)

Pulmonary sarcoidosis is associated with exosomal vitamin D-binding protein and inflammatory molecules (2017)
Journal of Allergy and Clinical Immunology
Maria-Jose Martinez-Bravo, Casper J.E. Wahlund, Khaleda Rahman Qazi, Robert Moulder, Ana Lukic, Olof Rådmark, Riitta Lahesmaa, Johan Grunewald, Anders Eklund, Susanne Gabrielsson
(
A1 Journal article – refereed)


Last updated on 2019-21-05 at 02:18