Filip Ginter

University lecturer, Bioinformatiikka (Tulevaisuuden teknologioiden laitos)
Adjunct professor, Tulevaisuuden teknologioiden laitoks yht (Tulevaisuuden teknologioiden laitos)
Assistant professor, Bioinformatiikka (Tulevaisuuden teknologioiden laitos)

figint@utu.fi
+358 2 333 8695
Vesilinnantie 5
Turku





Areas of expertise


Biography


Publications
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Applying BLAST to Text Reuse Detection in Finnish Newspapers and Journals, 1771–1910 (2017)
Aleksi Vesanto, Asko Nivala, Heli Rantala, Tapio Salakoski, Hannu Salmi, Filip Ginter
(A4 Conference proceedings)

A System for Identifying and Exploring Text Repetition in Large Historical Document Corpora (2017)
Aleksi Vesanto, Asko Nivala, Tapio Salakoski, Hannu Salmi, Filip Ginter
(A4 Conference proceedings)

Distributional Semantics of the Partitive A Argument Construction in Finnish (2017)
Huumo Tuomas, Kyröläinen Aki-Juhani, Kanerva Jenna, Luotolahti M. Juhani, Salakoski Tapio, Ginter Filip, Laippala Veronika
(A3 Book section, Chapters in research books)

An expanded evaluation of protein function prediction methods shows an improvement in accuracy (2016)
Jiang YX, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo DCE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SME, Martelli PL, Profiti G, Casadio R, Cao RZ, Zhong Z, Cheng JL, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Toronen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Dukka BKC, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang HX, Paccanaro A, Gillis J, Sedeno-Cortes AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong QT, Ning W, Zhou YP, Tian WD, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SCE, del Pozo A, Fernandez JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A, Rehman HU, Re M, Mesiti M, Valentini G, Bargsten JW, van Dijk ADJ, Gemovic B, Glisic S, Perovic V, Veljkovic V, Veljkovic N, Almeida-e-Silva DC, Vencio RZN, Sharan M, Vogel J, Kansakar L, Zhang S, Vucetic S, Wang Z, Sternberg MJE, Wass MN, Huntley RP, Martin MJ, O'Donovan C, Robinson PN, Moreau Y, Tramontano A, Babbitt PC, Brenner SE, Linial M, Orengo CA, Rost B, Greene CS, Mooney SD, Friedberg I, Radivojac P
(A1 Journal article (refereed))

Cross-Lingual Pronoun Prediction with Deep Recurrent Neural Networks (2016)
Juhani Luotolahti, Jenna Kanerva, Filip Ginter
(A4 Conference proceedings)

Deep Learning With Minimal Training Data: TurkuNLP Entry in the BioNLP Shared Task 2016 (2016)
Farrokh Mehryary, Jari Bjorne, Sampo Pyysalo, Tapio Salakoski, Filip Ginter
(A4 Conference proceedings)

Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification (2016)
Journal of Biomedical Semantics
Mehryary F, Kaewphan S, Hakala K, Ginter F
(B1 Non-refereed journal articles)

Phrase-Based SMT for Finnish with More Data, Better Models and Alternative Alignment and Translation Tools (2016)
Jörg Tiedemann, Fabienne Cap, Jenna Kanerva, Filip Ginter, Sara Stymne, Robert östling, Marion Di Marco
(A4 Conference proceedings)

Sentence-initial discourse markers in the Finnish Internet (2016)
Laippala Veronika, Kyröläinen Aki-Juhani,Komppa Johanna, Vilkuna Maria, Kalliokoski Jyrki, Ginter Filip
(A4 Conference proceedings)

Syntactic analyses and named entity recognition for PubMed and. PubMed Central — up-to-the-minute (2016)
Kai Hakala, Suwisa Kaewphan, Tapio Salakoski, Filip Ginter
(A4 Conference proceedings)

Universal Dependencies v1: A Multilingual Treebank Collection (2016)
Joakim Nivre, Marie-Catherine de Marneffe, Filip Ginter, Yoav Goldberg, Jan Hajic, Christopher D. Manning, Ryan McDonald, Slav Petrov, Sampo Pyysalo, Natalia Silveira, Reut Tsarfaty, Daniel Zeman
(A4 Conference proceedings)

Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis (2015)
BMC Bioinformatics
Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter
(A1 Journal article (refereed))

Care episode retrieval: distributional semantic models for information retrieval in the clinical domain (2015)
BMC Medical Informatics and Decision Making
Hans Moen, Filip Ginter, Erwin Marsi, Laura-Maria Peltonen, Tapio Salakoski, Sanna Salanterä
(A1 Journal article (refereed))

Cell line name recognition in support of the identification of synthetic lethality in cancer from text – Cell line name recognition (2015)
Bioinformatics
Suwisa Kaewphan, Sofie Van Landeghem, Tomoko Ohta, Yves Van de Peer, Filip Ginter, Sampo Pyysalo
(A1 Journal article (refereed))

Morphological Segmentation and OPUS for Finnish-English Machine Translation (2015)
Tiedemann Jörg, Ginter Filip, Kanerva Jenna
(A4 Conference proceedings)

Sentence Compression for Automatic Subtitling (2015)
Juhani Luotolahti, Filip Ginter
(A4 Conference proceedings)

SETS: Scalable and Efficient Tree Search in Dependency Graphs (2015)
Juhani Luotolahti, Jenna Kanerva, Sampo Pyysalo, Filip Ginter
(A4 Conference proceedings)

Sharing annotations better: RESTful Open Annotation (2015)
Pyysalo Sampo, Campos Jorge, Cejuela Juan Miguel, Ginter Filip, Hakala Kai, Li Chen, Stenetorp Pontus, Jensen Lars Juhl
(A4 Conference proceedings)

Syntactic Ngrams as Keystructures Reflecting Typical Syntactic Patterns of Corpora in Finnish (2015)
Procedia Social and Behavioral Sciences
Laippala Veronika, Kanerva Jenna, Ginter Filip
(A1 Journal article (refereed))

The Finnish Proposition Bank (2015)
Language Resources and Evaluation
Haverinen K, Kanerva J, Kohonen S, Missila A, Ojala S, Viljanen T, Laippala V, Ginter F
(A1 Journal article (refereed))




Last updated on 2017-13-09 at 16:02