Maria Jaakkola
Publications
- Gene expression signature predicts rate of type 1 diabetes progression (2023)
- EBioMedicine
(Refereed journal article or data article (A1)) - Quantitative Perfusion Imaging with Total-Body PET (2023)
- Journal of Nuclear Medicine
(Refereed review article in scientific journal (A2)) - Segmentation of Dynamic Total-Body [18F]-FDG PET Images Using Unsupervised Clustering (2023)
- International Journal of Biomedical Imaging
(Refereed journal article or data article (A1)) - Estimating cell type-specific differential expression using deconvolution (2022)
- Briefings in Bioinformatics
(Refereed review article in scientific journal (A2)) - Extracting information from high-throughput gene expression data with pathway analysis and deconvolution (2022) Jaakkola Maria
(Doctoral dissertation (article) (G5)) - Pancreas Whole Tissue Transcriptomics Highlights the Role of the Exocrine Pancreas in Patients With Recently Diagnosed Type 1 Diabetes (2022)
- Frontiers in Endocrinology
(Refereed journal article or data article (A1)) - Computational deconvolution to estimate cell type-specific gene expression from bulk data (2021)
- NAR Genomics and Bioinformatics: Nucleic Acids Research Genomics and Bioinformatics
(Refereed journal article or data article (A1)) - Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge (2021)
- npj Digital Medicine
(Refereed journal article or data article (A1)) - A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection (2018)
- Nature Communications
(Refereed journal article or data article (A1)) - Enterovirus-associated changes in blood transcriptomic profiles of children with genetic susceptibility to type 1 diabetes (2018)
- Diabetologia
(Refereed journal article or data article (A1)) - PASI: A novel pathway method to identify delicate group effects (2018)
- PLoS ONE
(Refereed journal article or data article (A1)) - Comparison of methods to detect differentially expressed genes between single-cell populations (2017)
- Briefings in Bioinformatics
(Refereed journal article or data article (A1)) - ROTS: An R package for reproducibility-optimized statistical testing (2017)
- PLoS Computational Biology
Laura L. Elo
(Refereed journal article or data article (A1)) - Empirical comparison of structure-based pathway methods (2016)
- Briefings in Bioinformatics
(Refereed journal article or data article (A1))